Explore projects
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Scripts and template configuration files for the trio whole exome sequencing analysis done under contract to the NHS Scotland Clinical Genetics Services.
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Nextflow pipeline for retrieving sequencing depths of samples mitochondrial genomes.
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NUMT removal and variant caller benchmarking for low mtDNA heteroplasmies.
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Mitochondrial variant caller benchmarking for low coverage single-cell RNA-Seq data.
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Nextflow pipeline for cell-level variant calling in 10x single-cell RNA-sequencing data.
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Repository for launching the baal-nf pipeline on deeply sequenced CLIP-seq samples
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RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
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RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
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