Explore projects

PlanArt is a modular software for testing and comparing computational models of human speech articulation planning.

Time-series analysis

End-to-end automated processing of live-cell imaging data. Fork (via mirror at https://git.ecdf.ed.ac.uk/swain-lab/aliby/aliby-mirror) of https://gitlab.com/aliby/aliby.

Ab Initio Augmented Structure Solving Engine

Hybrid methodology combining Empirical Potential-based Structure Refinement (EPSR) fitting of total scattering data with first-principles quantum mechanical calculations (Density Functional Theory).

Corrected Meta Analysis (CMA) on Snakemake

MorphOMatic is a MATLAB-based app designed to extract cellular features across 2D microscopy slides.