diff --git a/docs/run-notes/19258_run_notes.md b/docs/run-notes/19258_run_notes.md new file mode 100644 index 0000000000000000000000000000000000000000..b54413b5460832b5be0e035e193f086d9a0e7cf9 --- /dev/null +++ b/docs/run-notes/19258_run_notes.md @@ -0,0 +1,21 @@ +# Trio whole exome batch 19285 (EdGe) + +* The urgent family is 438158. +* We know that sample 129421 (proband from family 436427) is going to fail – there was an issue during set up for this one. +* Family 438023 – Quad, for shared analysis between two sibs and trio analysis per sib (129760 and 129850). + +Duos/singleton – for Congenica only +* 435163 (duo) +* 436090 (duo) +* 436525 (singleton) + +# QC + +* Pedigree check ok +* Samples with slightly low coverage: + * 128940_435163 43X + * 128993_429270 47X + * 126656_429218 48X +* Contamination check ok +* Sample 129421 was not delivered - don't analyze family 436427, parents QC'd ok +* Sequencing QC check ok