diff --git a/docs/Software_installation.md b/docs/Software_installation.md index 38f45515c01bdb4712512316822df879d135f083..ac856264e9eadc1fd4b33b6d13e5d469f70847b7 100644 --- a/docs/Software_installation.md +++ b/docs/Software_installation.md @@ -140,3 +140,13 @@ cd XlsxWriter /home/u035/project/software/bcbio/anaconda/bin/python3 setup.py install --prefix /home/u035/project/software rsync -av xlsxwriter ../../lib/python3.6/site-packages ``` + +## GATK 3.8 + +``` +cd /home/u035/project/software/install +wget https://storage.googleapis.com/gatk-software/package-archive/gatk/GenomeAnalysisTK-3.8-0-ge9d806836.tar.bz2 +bzip2 -d GenomeAnalysisTK-3.8-0-ge9d806836.tar.bz2 +tar -xf GenomeAnalysisTK-3.8-0-ge9d806836.tar +mv GenomeAnalysisTK-3.8-0-ge9d806836 ../GenomeAnalysisTK-3.8 +```