diff --git a/trio_whole_exome_config.sh b/trio_whole_exome_config.sh index 2949b330cf907f2dcae465bb7b2e4b1ba95def96..74d8afa3af1c8bffffed21d8b596accef3801946 100644 --- a/trio_whole_exome_config.sh +++ b/trio_whole_exome_config.sh @@ -5,7 +5,7 @@ SCRIPTS=/home/u027/project/scripts BCBIO_TEMPLATE=$SCRIPTS/trio_whole_exome_bcbio_template.yaml -TARGET=/home/u027/project/resources/Twist_Exome_Target_hg38.plus15bp.bed +TARGET=/home/u027/project/resources/Twist_Exome_RefSeq_targets_hg38.plus15bp.bed DOWNLOAD_DIR=/scratch/u027/project/trio_whole_exome/data REFERENCE_GENOME=/home/u027/project/software/bcbio/genomes/Hsapiens/hg38/seq/hg38.fa