diff --git a/docs/Setup_variant_prioritization.md b/docs/Setup_variant_prioritization.md index 5f5cd18ce2fac73c9dc6b3c8914c1864e1c2e98d..4b2e9e57f6a5f7f45aff4e81cd58b4d3f2b769b2 100644 --- a/docs/Setup_variant_prioritization.md +++ b/docs/Setup_variant_prioritization.md @@ -55,6 +55,7 @@ types => {map {$_ => 1} qw(splice_donor_variant ... (line 145) All external datasets listed for the `af_from_vcf_keys flag` (gnomADe_r2.1.1_GRCh38|gnomADg_r3.1.1_GRCh38) in: * `/home/u035/u035/shared/scripts/process_NHS_WES_trio.sh` * `/home/u035/u035/shared/scripts/process_NHS_WES_aff_probands.sh` + must be available locally (see below for downloading gnomADe and gnomADg datasets) * gnomADg dataset (r3.1.1, downloaded 23/08/2021): `/home/u035/u035/shared/resources/gnomad/r3.1.1/genomes`