From c428be734166105a948afa3fe85f4da54049e0e7 Mon Sep 17 00:00:00 2001 From: ameyner2 <alison.meynert@igmm.ed.ac.uk> Date: Thu, 3 Sep 2020 14:29:32 +0100 Subject: [PATCH] Added RTG tools and IGV to installation list --- docs/Software_installation.md | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) diff --git a/docs/Software_installation.md b/docs/Software_installation.md index 8af1a56..502a63f 100644 --- a/docs/Software_installation.md +++ b/docs/Software_installation.md @@ -147,3 +147,22 @@ bzip2 -d GenomeAnalysisTK-3.8-0-ge9d806836.tar.bz2 tar -xf GenomeAnalysisTK-3.8-0-ge9d806836.tar mv GenomeAnalysisTK-3.8-0-ge9d806836 ../GenomeAnalysisTK-3.8 ``` + +## RTG tools + +``` +cd /home/u035/project/software +wget https://github.com/RealTimeGenomics/rtg-tools/releases/download/3.11/rtg-tools-3.11-linux-x64.zip +unzip rtg-tools-3.11-linux-x64.zip +rm rtg-tools-3.11-linux-x64.zip +``` + +## IGV + +``` +cd /home/u035/project/software +wget https://data.broadinstitute.org/igv/projects/downloads/2.8/IGV_Linux_2.8.9.zip +unzip IGV_Linux_2.8.9.zip +rm IGV_Linux_2.8.9.zip +``` + -- GitLab