diff --git a/docs/Software_installation.md b/docs/Software_installation.md
index 1bdb1de0def993301ea0f1b0a248e2850f0199ae..a3fa4e8dd1f903cc6e6b722ad47162dd09ac4fea 100644
--- a/docs/Software_installation.md
+++ b/docs/Software_installation.md
@@ -32,13 +32,6 @@ DATE=`date +%Y%m%d%H%M`
 /home/u035/project/software/bcbio/tools/bin/bcbio_nextgen.py upgrade -u development --tools &> bcbio_install_upgrade_tools_${DATE}.log
 ```
 
-Install datatarget variation
-
-```
-DATE=`date +%Y%m%d%H%M`
-/home/u035/project/software/bcbio/tools/bin/bcbio_nextgen.py upgrade -u skip --datatarget variation &> bcbio_install_datatarget_variation_${DATE}.log
-```
-
 Install datatarget vep
 
 ```