From e1785a535f27a15509a140ac331a0452a6fa558b Mon Sep 17 00:00:00 2001
From: ameyner2 <alison.meynert@ed.ac.uk>
Date: Fri, 30 Apr 2021 19:09:43 +0100
Subject: [PATCH] Add version to config prep log for CRF data
---
docs/SOP_alignment_variant_annotation.md | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/docs/SOP_alignment_variant_annotation.md b/docs/SOP_alignment_variant_annotation.md
index 165c92d..5cb7159 100644
--- a/docs/SOP_alignment_variant_annotation.md
+++ b/docs/SOP_alignment_variant_annotation.md
@@ -213,7 +213,7 @@ version=<version>
sample_suffix=<sample_suffix>
/home/u035/project/scripts/prepare_bcbio_config_crf.sh \
/home/u035/project/scripts/trio_whole_exome_crf_config.sh \
- $project_id $version $sample_suffix &> $project_id.log
+ $project_id $version $sample_suffix &> ${version}_${project_id}.log
X=`wc -l $PARAMS_DIR/$project_id.family_ids.txt | awk '{print $1}'`
```
--
GitLab