From 365a38875b3216d03d4e388e05a4dca2a08c5417 Mon Sep 17 00:00:00 2001
From: Peter Alexander <p.m.w.alexander@gmail.com>
Date: Thu, 9 Feb 2017 11:48:22 +0000
Subject: [PATCH] Further script changes
---
scripts/scheduleScenarios.sh | 9 +++++----
1 file changed, 5 insertions(+), 4 deletions(-)
diff --git a/scripts/scheduleScenarios.sh b/scripts/scheduleScenarios.sh
index 50a38fc3..77aa5c43 100755
--- a/scripts/scheduleScenarios.sh
+++ b/scripts/scheduleScenarios.sh
@@ -7,10 +7,10 @@ fi
filename="$1"
-output_dir=/Users/peteralexander/Documents/R_Workspace/UNPLUM/dummy/scenarios/
+output_dir=/exports/csce/eddie/geos/groups/LURG/models/PLUM/output
echo "Starting scenarios in $output_dir"
-while read -r datarow $filename
+while read -r datarow
do
IFS=',' read -r -a array <<< "$datarow"
@@ -18,7 +18,7 @@ do
header=( "${array[@]}" )
else
scenario="${array[0]}"
- scenario_dir=$output_dir$scenario
+ scenario_dir=$output_dir/$scenario
echo $scenario
if [ ! -d "$scenario_dir" ]; then
@@ -26,7 +26,8 @@ do
continue;
fi
- echo "qsub runPlum.sh scenario_dir"
+ echo "qsub /exports/csce/eddie/geos/groups/LURG/models/PLUM/plumv2/scripts/runPlum.sh $scenario"
+ qsub /exports/csce/eddie/geos/groups/LURG/models/PLUM/plumv2/scripts/runPlum.sh $scenario
fi
done < $filename
--
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