From 7ef7901ea91f09ee0ea98f3e76c707477ef1c09f Mon Sep 17 00:00:00 2001
From: Peter Alexander <p.m.w.alexander@gmail.com>
Date: Sun, 16 Apr 2017 10:47:43 +0100
Subject: [PATCH] cluster script changes
---
scripts/concatOutputLc.sh | 6 +++---
scripts/scheduleScenarios.sh | 4 ++--
2 files changed, 5 insertions(+), 5 deletions(-)
diff --git a/scripts/concatOutputLc.sh b/scripts/concatOutputLc.sh
index cddfff9f..fedaac5d 100755
--- a/scripts/concatOutputLc.sh
+++ b/scripts/concatOutputLc.sh
@@ -4,9 +4,9 @@ if [ "$#" -ne 1 ]; then
exit
fi
-
-concatLcFile=$1/lc_concat.txt
-concatPriceFile=$1/price_concat.txt
+cd $1
+concatLcFile=lc_concat.txt
+concatPriceFile=price_concat.txt
echo "Scenario,Year,Cropland,Pasture,ManForest,UnmanForest,Natural,FertCrop,FertPasture,IrrigCrop,IrrigPasture" > $concatLcFile
echo "Scenario,Year,Crop,Imports,Exports,Price,Stocks" > $concatPriceFile
diff --git a/scripts/scheduleScenarios.sh b/scripts/scheduleScenarios.sh
index 55a180b6..50ca3b82 100755
--- a/scripts/scheduleScenarios.sh
+++ b/scripts/scheduleScenarios.sh
@@ -29,8 +29,8 @@ do
jobName=$ensemble"_"$scenario
- echo "qsub -N $jobName /exports/csce/eddie/geos/groups/LURG/models/PLUM/plumv2/scripts/runPlum.sh $ensemble/$scenario"
- qsub -N $jobName /exports/csce/eddie/geos/groups/LURG/models/PLUM/plumv2/scripts/runPlum.sh $ensemble/$scenario
+ echo "qsub -hold_jid calib -N $jobName /exports/csce/eddie/geos/groups/LURG/models/PLUM/plumv2/scripts/runPlum.sh $ensemble/$scenario"
+ qsub -hold_jid calib -N $jobName /exports/csce/eddie/geos/groups/LURG/models/PLUM/plumv2/scripts/runPlum.sh $ensemble/$scenario
fi
done < $filename
--
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