From 20a4e365b70041d51420d85d8ec2b7cdac6621b1 Mon Sep 17 00:00:00 2001
From: Axel Kohlmeyer <akohlmey@gmail.com>
Date: Fri, 6 Jan 2017 21:30:13 -0500
Subject: [PATCH] reduce warning when processing manual with sphinx
---
doc/src/commands.txt | 1 +
doc/src/computes.txt | 1 +
doc/src/fix_grem.txt | 4 ++--
3 files changed, 4 insertions(+), 2 deletions(-)
diff --git a/doc/src/commands.txt b/doc/src/commands.txt
index c5f22c666f..2fdb69ea4d 100644
--- a/doc/src/commands.txt
+++ b/doc/src/commands.txt
@@ -91,6 +91,7 @@ Commands :h1
suffix
tad
temper
+ temper_grem
thermo
thermo_modify
thermo_style
diff --git a/doc/src/computes.txt b/doc/src/computes.txt
index e7e54a6b3b..1d01798791 100644
--- a/doc/src/computes.txt
+++ b/doc/src/computes.txt
@@ -35,6 +35,7 @@ Computes :h1
compute_erotate_sphere_atom
compute_event_displace
compute_fep
+ compute_global_atom
compute_group_group
compute_gyration
compute_gyration_chunk
diff --git a/doc/src/fix_grem.txt b/doc/src/fix_grem.txt
index eac4d6f4ba..3fc5c1a10e 100644
--- a/doc/src/fix_grem.txt
+++ b/doc/src/fix_grem.txt
@@ -29,7 +29,7 @@ fix fxgREM all grem 502 -0.15 -80000 fxnvt :pre
[Description:]
This fix implements the molecular dynamics version of the generalized
-replica exchange method (gREM) originally developed by "(Kim)"_#Kim,
+replica exchange method (gREM) originally developed by "(Kim)"_#Kim2010,
which uses non-Boltzmann ensembles to sample over first order phase
transitions. The is done by defining replicas with an enthalpy
dependent effective temperature
@@ -103,7 +103,7 @@ npt"_fix_nh.html, "thermo_modify"_thermo_modify.html
:line
-:link(Kim)
+:link(Kim2010)
[(Kim)] Kim, Keyes, Straub, J Chem. Phys, 132, 224107 (2010).
:link(Malolepsza)
--
GitLab