diff --git a/doc/compute.html b/doc/compute.html index 54744bf3d0dcf331fa3cfbac9f39a769c786504b..bfe35ef64eb0da0b1a93f2dfeaaf43d4d023b23f 100644 --- a/doc/compute.html +++ b/doc/compute.html @@ -104,6 +104,11 @@ defined in LAMMPS: <LI><A HREF = "compute_variable.html">variable</A> - calculate a scalar value from a variable <LI><A HREF = "compute_variable_atom.html">variable/atom</A> - calculate a formula for each atom </UL> +<P>There are also additional compute styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the compute section of <A HREF = "Section_commands.html#3_5">this +page</A>. +</P> <P><B>Restrictions:</B> none </P> <P><B>Related commands:</B> diff --git a/doc/compute.txt b/doc/compute.txt index 477f407ea2e8e6c318197fb0f5b29ccadadaaefd..67c53d3be48ea923f1cd115ae4a99a00bbbeb367 100644 --- a/doc/compute.txt +++ b/doc/compute.txt @@ -101,6 +101,11 @@ defined in LAMMPS: "variable"_compute_variable.html - calculate a scalar value from a variable "variable/atom"_compute_variable_atom.html - calculate a formula for each atom :ul +There are also additional compute styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the compute section of "this +page"_Section_commands.html#3_5. + [Restrictions:] none [Related commands:] diff --git a/doc/fix.html b/doc/fix.html index 7581c19e6928199753a0e08e766b88c26bc8b0ef..7af7753e3cf01f5aef92bcc48437f155270c3282 100644 --- a/doc/fix.html +++ b/doc/fix.html @@ -128,6 +128,11 @@ for individual fixes for info on which ones can be restarted. <LI><A HREF = "fix_wall_reflect.html">fix wall/reflect</A> - reflecting wall(s) <LI><A HREF = "fix_wiggle.html">fix wiggle</A> - oscillate walls and frozen atoms </UL> +<P>There are also additional fix styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the fix section of <A HREF = "Section_commands.html#3_5">this +page</A>. +</P> <P><B>Restrictions:</B> </P> <P>Some fix styles are part of specific packages. They are only enabled diff --git a/doc/fix.txt b/doc/fix.txt index 2e96c7103638973e040b5d1d4668be09defef7a3..70347560fd37aa59fa34ff8d298cdee10c60ed87 100644 --- a/doc/fix.txt +++ b/doc/fix.txt @@ -133,6 +133,11 @@ Here is an alphabetic list of fix styles available in LAMMPS: "fix wall/reflect"_fix_wall_reflect.html - reflecting wall(s) "fix wiggle"_fix_wiggle.html - oscillate walls and frozen atoms :ul +There are also additional fix styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the fix section of "this +page"_Section_commands.html#3_5. + [Restrictions:] Some fix styles are part of specific packages. They are only enabled diff --git a/doc/kspace_style.html b/doc/kspace_style.html index 69f337f524846dad1199df361c7cc1615104e63e..96d9020de161fb6c42f8f2756850a0fe67b56b62 100644 --- a/doc/kspace_style.html +++ b/doc/kspace_style.html @@ -15,7 +15,7 @@ </P> <PRE>kspace_style style value </PRE> -<UL><LI>style = <I>none</I> or <I>ewald</I> or <I>pppm</I> +<UL><LI>style = <I>none</I> or <I>ewald</I> or <I>pppm</I> or others as referenced below <PRE> <I>none</I> value = none <I>ewald</I> value = precision @@ -59,6 +59,11 @@ adds a charge at the massless 4th site in each TIP4P water molecule. It should be used with <A HREF = "pair_style.html">pair styles</A> with a <I>long/tip4p</I> in their style name. </P> +<P>There are also additional kspace styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the kspace section of <A HREF = "Section_commands.html#3_5">this +page</A>. +</P> <P>When a kspace style is used, a pair style that includes the short-range correction to the pairwise Coulombic forces must also be selected. These styles are ones that have a <I>coul/long</I> in their diff --git a/doc/kspace_style.txt b/doc/kspace_style.txt index 8dafaf56c35210c8c00fcec865fb92282d24e392..3c1e68692984c64126e96b93774148f334f65031 100644 --- a/doc/kspace_style.txt +++ b/doc/kspace_style.txt @@ -12,7 +12,7 @@ kspace_style command :h3 kspace_style style value :pre -style = {none} or {ewald} or {pppm} :ulb,l +style = {none} or {ewald} or {pppm} or others as referenced below :ulb,l {none} value = none {ewald} value = precision precision = desired accuracy @@ -54,6 +54,11 @@ adds a charge at the massless 4th site in each TIP4P water molecule. It should be used with "pair styles"_pair_style.html with a {long/tip4p} in their style name. +There are also additional kspace styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the kspace section of "this +page"_Section_commands.html#3_5. + When a kspace style is used, a pair style that includes the short-range correction to the pairwise Coulombic forces must also be selected. These styles are ones that have a {coul/long} in their diff --git a/doc/pair_coeff.html b/doc/pair_coeff.html index 1db5c00c51937d28d7e31b46b280f568a7137d93..04052bdba1bb8b00ee50075a0dbc787a515671d1 100644 --- a/doc/pair_coeff.html +++ b/doc/pair_coeff.html @@ -131,6 +131,11 @@ the pair_style command, and coefficients specified by the associated <LI><A HREF = "pair_tersoff.html">pair_style tersoff</A> - Tersoff 3-body potential <LI><A HREF = "pair_yukawa.html">pair_style yukawa</A> - Yukawa potential </UL> +<P>There are also additional pair styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the pair section of <A HREF = "Section_commands.html#3_5">this +page</A>. +</P> <HR> <P><B>Restrictions:</B> diff --git a/doc/pair_coeff.txt b/doc/pair_coeff.txt index 9114bfd8455afa7b36d9e475e7a6a0581a44b4f9..24bb834cb20bd0c4491ad26a2f1cd0a6552566e0 100644 --- a/doc/pair_coeff.txt +++ b/doc/pair_coeff.txt @@ -127,6 +127,11 @@ the pair_style command, and coefficients specified by the associated "pair_style tersoff"_pair_tersoff.html - Tersoff 3-body potential "pair_style yukawa"_pair_yukawa.html - Yukawa potential :ul +There are also additional pair styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the pair section of "this +page"_Section_commands.html#3_5. + :line [Restrictions:] diff --git a/doc/pair_style.html b/doc/pair_style.html index ed0ce87e1ffe51fa64d590b8c168e49cf56a24ab..b7f9ccc66ef98a6c07182c956c4ded5c9371497e 100644 --- a/doc/pair_style.html +++ b/doc/pair_style.html @@ -15,19 +15,7 @@ </P> <PRE>pair_style style args </PRE> -<UL><LI>style = one of the following - -<UL><LI><I>none</I>, <I>hybrid</I>, <I>hybrid/overlay</I>, <I>airebo</I>, <I>buck</I>, <I>buck/coul/cut</I>, -<LI><I>buck/coul/long</I>, <I>coul/cut</I>, <I>coul/long</I>, <I>dipole/cut</I>, <I>dpd</I>, <I>eam</I>, -<LI><I>eam/opt</I>, <I>eam/alloy</I>, <I>eam/alloy/opt</I>, <I>eam/fs</I>, <I>eam/fs/opt</I>, -<LI><I>gayberne</I>, <I>gran/hertzian</I>, <I>gran/history</I>, <I>gran/no_history</I>, -<LI><I>lj/charmm/coul/charmm</I>, <I>lj/charmm/coul/charmm/implicit</I>, -<LI><I>lj/charmm/coul/long</I>, <I>lj/charmm/coul/long/opt</I>, <I>lj/class2</I>, -<LI><I>lj/class2/coul/cut</I>, <I>lj/class2/coul/long</I>, <I>lj/cut</I>, <I>lj/cut/opt</I>, -<LI><I>lj/cut/coul/cut</I>, <I>lj/cut/coul/debye</I>, <I>lj/cut/coul/long</I>, -<LI><I>lj/cut/coul/long/tip4p</I>, <I>lj/expand</I>, <I>lj/smooth</I>, <I>meam</I>, <I>morse</I>, -<LI><I>morse/opt</I>, <I>soft</I>, <I>sw</I>, <I>table</I>, <I>tersoff</I>, <I>yukawa</I> -</UL> +<UL><LI>style = one of the styles from the list below <LI>args = arguments used by a particular style </UL> <P><B>Examples:</B> @@ -148,6 +136,11 @@ the pair_style command, and coefficients specified by the associated <LI><A HREF = "pair_tersoff.html">pair_style tersoff</A> - Tersoff 3-body potential <LI><A HREF = "pair_yukawa.html">pair_style yukawa</A> - Yukawa potential </UL> +<P>There are also additional pair styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the pair section of <A HREF = "Section_commands.html#3_5">this +page</A>. +</P> <HR> <P><B>Restrictions:</B> diff --git a/doc/pair_style.txt b/doc/pair_style.txt index c005cd792737b9eacb249fc63e4ec79c78303831..5266adcb5b7703b4c807b5d6ae1af512f486ae72 100644 --- a/doc/pair_style.txt +++ b/doc/pair_style.txt @@ -12,20 +12,8 @@ pair_style command :h3 pair_style style args :pre -style = one of the following :ulb,l - -{none}, {hybrid}, {hybrid/overlay}, {airebo}, {buck}, {buck/coul/cut}, -{buck/coul/long}, {coul/cut}, {coul/long}, {dipole/cut}, {dpd}, {eam}, -{eam/opt}, {eam/alloy}, {eam/alloy/opt}, {eam/fs}, {eam/fs/opt}, -{gayberne}, {gran/hertzian}, {gran/history}, {gran/no_history}, -{lj/charmm/coul/charmm}, {lj/charmm/coul/charmm/implicit}, -{lj/charmm/coul/long}, {lj/charmm/coul/long/opt}, {lj/class2}, -{lj/class2/coul/cut}, {lj/class2/coul/long}, {lj/cut}, {lj/cut/opt}, -{lj/cut/coul/cut}, {lj/cut/coul/debye}, {lj/cut/coul/long}, -{lj/cut/coul/long/tip4p}, {lj/expand}, {lj/smooth}, {meam}, {morse}, -{morse/opt}, {soft}, {sw}, {table}, {tersoff}, {yukawa} :ul - -args = arguments used by a particular style :l,ule +style = one of the styles from the list below +args = arguments used by a particular style :ul [Examples:] @@ -144,6 +132,11 @@ the pair_style command, and coefficients specified by the associated "pair_style tersoff"_pair_tersoff.html - Tersoff 3-body potential "pair_style yukawa"_pair_yukawa.html - Yukawa potential :ul +There are also additional pair styles submitted by users which are +included in the LAMMPS distribution. The list of these with links to +the individual styles are given in the pair section of "this +page"_Section_commands.html#3_5. + :line [Restrictions:]