/* -*- c++ -*- ---------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #ifdef COMPUTE_CLASS ComputeStyle(aggregate/atom,ComputeAggregateAtom) #else #ifndef LMP_COMPUTE_AGGREGATE_ATOM_H #define LMP_COMPUTE_AGGREGATE_ATOM_H #include "compute.h" namespace LAMMPS_NS { class ComputeAggregateAtom : public Compute { public: ComputeAggregateAtom(class LAMMPS *, int, char **); ~ComputeAggregateAtom(); void init(); void init_list(int, class NeighList *); void compute_peratom(); int pack_forward_comm(int, int *, double *, int, int *); void unpack_forward_comm(int, int, double *); int pack_reverse_comm(int, int, double *); void unpack_reverse_comm(int, int *, double *); double memory_usage(); private: int nmax,commflag; double cutsq; class NeighList *list; double *aggregateID; }; } #endif #endif /* ERROR/WARNING messages: E: Illegal ... command Self-explanatory. Check the input script syntax and compare to the documentation for the command. You can use -echo screen as a command-line option when running LAMMPS to see the offending line. E: Compute aggregate/atom used when bonds are not allowed UNDOCUMENTED E: Cannot use compute aggregate/atom unless atoms have IDs Atom IDs are used to identify aggregates. E: Compute aggregate/atom requires a bond style to be defined This is so that a bond list is generated which is used to find aggregates. E: Compute cluster/atom requires a pair style to be defined UNDOCUMENTED E: Compute cluster/atom cutoff is longer than pairwise cutoff UNDOCUMENTED W: More than one compute aggregate/atom It is not efficient to use compute aggregate/atom more than once. */