From 07777ef895c2fd68a4b04aedd12dab83726bbbce Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Al=C3=A1n=20Mu=C3=B1oz?= <amuoz@ed.ac.uk>
Date: Fri, 30 Jul 2021 14:47:10 +0100
Subject: [PATCH] bugfixes
Former-commit-id: d0daeb74eccbe4de5f7d14b1223cb487719d72c1
---
core/processor.py | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/core/processor.py b/core/processor.py
index ce910885..f6ae5438 100644
--- a/core/processor.py
+++ b/core/processor.py
@@ -52,7 +52,7 @@ class PostProcessorParameters(ParametersABC):
class PostProcessor:
def __init__(self, filename, parameters):
self.parameters = parameters
- # self._signals = Signal(filename)
+ self._signal = Signal(filename)
self._writer = Writer(filename)
self.datasets = parameters["datasets"]
@@ -66,11 +66,11 @@ class PostProcessor:
]
def run(self):
- new_ids = self.merger.run(self._signals[self.datasets["merger"]])
+ new_ids = self.merger.run(self._signal[self.datasets["merger"]])
for name, ids in new_ids.items():
self._writer.write(ids, "/postprocessing/cell_info/")
- picks = self.picker.run(self._writer[self.datasets["picker"]])
- return merge
+ picks = self.picker.run(self._signal[self.datasets["picker"]])
+ return picks
# print(merge, picks)
# for process, dataset, outpath in zip(
# self.processes, self.datasets["processes"], self.outpaths
--
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