from setuptools import setup, find_packages print("find_packages outputs ", find_packages("aliby")) setup( name="aliby", version="0.1.2", packages=find_packages(), # package_dir={"": "aliby"}, # packages=['aliby', 'aliby.io'], # include_package_data=True, url="", license="", author="Diane Adjavon", author_email="diane.adjavon@ed.ac.uk", description="Core utilities for microscopy pipeline", python_requires=">=3.7", install_requires=[ "numpy", "dask", "pathos", "tqdm", "pandas", "scikit-image", "opencv-python", "requests_toolbelt", "h5py==2.10", "tables", "imageio==2.8.0", "omero-py>=5.6.2", "pathos", "zeroc-ice==3.6.5", "tensorflow>=1.15,<=2.3", "aliby-agora", "aliby-argo", "aliby-baby", "aliby-extraction", "aliby-post", ], )