Commit a6f5a318 authored by Alán Muñoz's avatar Alán Muñoz
Browse files

docs(README): update unused sections

parent 5330dd23
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......@@ -44,6 +44,7 @@ See our [installation instructions](
### Raw data access
ALIBY's tooling can also be used as an interface to OMERO servers, taking care of fetching data when needed.
from import Dataset
from import Image
......@@ -96,15 +97,6 @@ trap_tps = riv.get_trap_timepoints(trap_id, trange, ncols)
This can take several seconds at the moment.
For a speed-up: take fewer z-positions if you can.
If you're not sure what indices to use:
seg_expt.channels # Get a list of channels
channel = 'Brightfield'
ch_id = seg_expt.get_channel_index(channel)
n_traps = seg_expt.n_traps # Get the number of traps
#### Get the traps for a given time point
Alternatively, if you want to get all the traps at a given timepoint:
......@@ -116,4 +108,4 @@ seg_expt.get_tiles_timepoints(timepoint, tile_size=96, channels=None,
### Contributing
See [](./ for installation instructions.
See [CONTRIBUTING]( on how to help out or get involved.
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