From 13671055649146d8899feeff3c2799d1cbea8cab Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Al=C3=A1n=20Mu=C3=B1oz?= <alan.munoz@ed.ac.uk>
Date: Tue, 21 Mar 2023 13:09:10 +0000
Subject: [PATCH] fix(kymograph): fix import typo
---
src/agora/utils/kymograph.py | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/src/agora/utils/kymograph.py b/src/agora/utils/kymograph.py
index e10d4fb4..276bb3cd 100644
--- a/src/agora/utils/kymograph.py
+++ b/src/agora/utils/kymograph.py
@@ -6,7 +6,7 @@ import numpy as np
import pandas as pd
from sklearn.cluster import KMeans
-from agora.utils.indexing import validate_associatio n
+from agora.utils.indexing import validate_association
index_row = t.Tuple[str, str, int, int]
@@ -122,7 +122,9 @@ def bidirectional_retainment_filter(
def melt_reset(df: pd.DataFrame, additional_ids: t.Dict[str, pd.Series] = {}):
new_df = add_index_levels(df, additional_ids)
- return new_df.melt(ignore_index=False, var_name="time (minutes)", value_name="signal").reset_index()
+ return new_df.melt(
+ ignore_index=False, var_name="time (minutes)", value_name="signal"
+ ).reset_index()
# Drop cells that if used would reduce info the most
--
GitLab