From 2d3cdabba3a89440effa2155f1f1c920bfd6aa08 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Al=C3=A1n=20Mu=C3=B1oz?= <amuoz@ed.ac.uk>
Date: Wed, 29 Jun 2022 18:31:16 +0100
Subject: [PATCH] tweak(imageviewer):add TODO for RGB image
---
aliby/utils/imageViewer.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/aliby/utils/imageViewer.py b/aliby/utils/imageViewer.py
index 6b158a32..974180c1 100644
--- a/aliby/utils/imageViewer.py
+++ b/aliby/utils/imageViewer.py
@@ -343,8 +343,8 @@ class remoteImageViewer:
if norm and norm in ("l1", "l2", "max"):
images = {k: stretch_image(v) for k, v in images.items()}
- # images = [concat_pad(img, width, nrows) for img in images.values()]
images = [concat_pad(img, width, nrows) for img in images.values()]
+ # TODO convert to RGB to draw fluorescence with colour
tiled_imgs = {}
tiled_imgs["img"] = np.concatenate(images, axis=0)
tiled_imgs["cell_labels"] = np.concatenate(
--
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