From 5edce71500fa7a3f227a71c10bd17fc5ef26ebce Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Al=C3=A1n=20Mu=C3=B1oz?= <amuoz@ed.ac.uk>
Date: Wed, 29 Jun 2022 18:28:27 +0100
Subject: [PATCH] feat(imageViewer): Replace Set1 with Paired cmap
---
aliby/utils/imageViewer.py | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/aliby/utils/imageViewer.py b/aliby/utils/imageViewer.py
index f252f331..2199a0c9 100644
--- a/aliby/utils/imageViewer.py
+++ b/aliby/utils/imageViewer.py
@@ -20,6 +20,7 @@ import typing as t
import matplotlib.pyplot as plt
import numpy as np
+import seaborn as sns
import yaml
from agora.io.cells import CellsLinear as Cells
from agora.io.writer import load_attributes
@@ -34,7 +35,7 @@ default_colours = {
"Brightfield": "Greys_r",
"GFP": "Greens_r",
"mCherry": "Reds_r",
- "cell_label": "Set1",
+ "cell_label": sns.color_palette("Paired", as_cmap=True),
}
--
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