diff --git a/aliby/pipeline.py b/aliby/pipeline.py index f39d5d20a43a9df658f00ad510e740fc647e9f42..f5458c46a437c699f1818397bbcef3dbca5ae82c 100644 --- a/aliby/pipeline.py +++ b/aliby/pipeline.py @@ -256,8 +256,12 @@ class Pipeline(ProcessABC): process_from = 0 meta.run() - meta.add_fields( - {"omero_id,": config["general"]["id"], "image_id": image_id} + meta.add_fields( # Add non-logfile metadata + { + "omero_id,": config["general"]["id"], + "image_id": image_id, + "parameters": self.parameters.to_yaml(), + } ) try: tiler = Tiler.from_image(