diff --git a/src/aliby/tile/tiler.py b/src/aliby/tile/tiler.py index f25b97c4b55af9bc6190f6b6fafcc97f2b5ef727..e8ea4a972c57935c33e008139bee8c48c76848ed 100644 --- a/src/aliby/tile/tiler.py +++ b/src/aliby/tile/tiler.py @@ -256,18 +256,20 @@ class Tiler(StepABC): ---------- parameters: dictionary output of an instance of TilerParameters """ + imgdmy_obj = ImageDummy(parameters) + dummy_image = imgdmy_obj.get_data_lazy() dummy_omero_metadata = { - "size_x": 1, - "size_y": 1, - "size_z": 1, - "size_c": 1, - "size_t": 1, - "channels": ["Brightfield"], + "size_x": dummy_image.shape[3], + "size_y": dummy_image.shape[4], + "size_z": dummy_image.shape[2], + "size_c": dummy_image.shape[1], + "size_t": dummy_image.shape[0], + "channels": [parameters["ref_channel"]], "name": " ", } return cls( - ImageDummy(parameters), + imgdmy_obj, dummy_omero_metadata, TilerParameters.from_dict(parameters), )