diff --git a/poetry.lock b/poetry.lock
index c5138ede981eaa6e12470a501c91518d3adea632..c46d965f89409f7d92ac8bf305d0431b5bfbe93e 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,3 +1,5 @@
+# This file is automatically @generated by Poetry and should not be changed by hand.
+
[[package]]
name = "absl-py"
version = "1.2.0"
@@ -5,6 +7,10 @@ description = "Abseil Python Common Libraries, see https://github.com/abseil/abs
category = "main"
optional = false
python-versions = ">=3.6"
+files = [
+ {file = "absl-py-1.2.0.tar.gz", hash = "sha256:f568809938c49abbda89826223c992b630afd23c638160ad7840cfe347710d97"},
+ {file = "absl_py-1.2.0-py3-none-any.whl", hash = "sha256:5d15f85b8cc859c6245bc9886ba664460ed96a6fee895416caa37d669ee74a9a"},
+]
[[package]]
name = "aiosignal"
@@ -13,6 +19,10 @@ description = "aiosignal: a list of registered asynchronous callbacks"
category = "main"
optional = false
python-versions = ">=3.6"
+files = [
+ {file = "aiosignal-1.2.0-py3-none-any.whl", hash = "sha256:26e62109036cd181df6e6ad646f91f0dcfd05fe16d0cb924138ff2ab75d64e3a"},
+ {file = "aiosignal-1.2.0.tar.gz", hash = "sha256:78ed67db6c7b7ced4f98e495e572106d5c432a93e1ddd1bf475e1dc05f5b7df2"},
+]
[package.dependencies]
frozenlist = ">=1.1.0"
@@ -24,6 +34,10 @@ description = "A configurable sidebar-enabled Sphinx theme"
category = "dev"
optional = false
python-versions = "*"
+files = [
+ {file = "alabaster-0.7.12-py2.py3-none-any.whl", hash = "sha256:446438bdcca0e05bd45ea2de1668c1d9b032e1a9154c2c259092d77031ddd359"},
+ {file = "alabaster-0.7.12.tar.gz", hash = "sha256:a661d72d58e6ea8a57f7a86e37d86716863ee5e92788398526d58b26a4e4dc02"},
+]
[[package]]
name = "aliby-baby"
@@ -32,6 +46,10 @@ description = "Birth Annotator for Budding Yeast"
category = "main"
optional = false
python-versions = ">=3.7.1,<3.11"
+files = [
+ {file = "aliby-baby-0.1.15.tar.gz", hash = "sha256:3563f1a740e4a33dcb35be9242a3eca4ee4ca8f373590a6b74b5cc4d1ec29f37"},
+ {file = "aliby_baby-0.1.15-py3-none-any.whl", hash = "sha256:b2da8553ab6a59c72db846e6d40b73b03248b5af04b931e86026987ea23f7eba"},
+]
[package.dependencies]
colorama = ">=0.4.4,<0.5.0"
@@ -57,6 +75,10 @@ description = "A small Python module for determining appropriate platform-specif
category = "main"
optional = true
python-versions = "*"
+files = [
+ {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"},
+ {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"},
+]
[[package]]
name = "appnope"
@@ -65,6 +87,10 @@ description = "Disable App Nap on macOS >= 10.9"
category = "dev"
optional = false
python-versions = "*"
+files = [
+ {file = "appnope-0.1.3-py2.py3-none-any.whl", hash = "sha256:265a455292d0bd8a72453494fa24df5a11eb18373a60c7c0430889f22548605e"},
+ {file = "appnope-0.1.3.tar.gz", hash = "sha256:02bd91c4de869fbb1e1c50aafc4098827a7a54ab2f39d9dcba6c9547ed920e24"},
+]
[[package]]
name = "argon2-cffi"
@@ -73,6 +99,10 @@ description = "The secure Argon2 password hashing algorithm."
category = "dev"
optional = false
python-versions = ">=3.6"
+files = [
+ {file = "argon2-cffi-21.3.0.tar.gz", hash = "sha256:d384164d944190a7dd7ef22c6aa3ff197da12962bd04b17f64d4e93d934dba5b"},
+ {file = "argon2_cffi-21.3.0-py3-none-any.whl", hash = "sha256:8c976986f2c5c0e5000919e6de187906cfd81fb1c72bf9d88c01177e77da7f80"},
+]
[package.dependencies]
argon2-cffi-bindings = "*"
@@ -89,6 +119,29 @@ description = "Low-level CFFI bindings for Argon2"
category = "dev"
optional = false
python-versions = ">=3.6"
+files = [
+ {file = "argon2-cffi-bindings-21.2.0.tar.gz", hash = "sha256:bb89ceffa6c791807d1305ceb77dbfacc5aa499891d2c55661c6459651fc39e3"},
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+ {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:20ef543a89dee4db46a1a6e206cd015360e5a75822f76df533845c3cbaf72670"},
+ {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:ed2937d286e2ad0cc79a7087d3c272832865f779430e0cc2b4f3718d3159b0cb"},
+ {file = "argon2_cffi_bindings-21.2.0-pp38-pypy38_pp73-win_amd64.whl", hash = "sha256:5e00316dabdaea0b2dd82d141cc66889ced0cdcbfa599e8b471cf22c620c329a"},
+]
[package.dependencies]
cffi = ">=1.0.1"
@@ -104,6 +157,10 @@ description = "Annotate AST trees with source code positions"
category = "dev"
optional = false
python-versions = "*"
+files = [
+ {file = "asttokens-2.0.8-py2.py3-none-any.whl", hash = "sha256:e3305297c744ae53ffa032c45dc347286165e4ffce6875dc662b205db0623d86"},
+ {file = "asttokens-2.0.8.tar.gz", hash = "sha256:c61e16246ecfb2cde2958406b4c8ebc043c9e6d73aaa83c941673b35e5d3a76b"},
+]
[package.dependencies]
six = "*"
@@ -118,6 +175,10 @@ description = "An AST unparser for Python"
category = "main"
optional = false
python-versions = "*"
+files = [
+ {file = "astunparse-1.6.3-py2.py3-none-any.whl", hash = "sha256:c2652417f2c8b5bb325c885ae329bdf3f86424075c4fd1a128674bc6fba4b8e8"},
+ {file = "astunparse-1.6.3.tar.gz", hash = "sha256:5ad93a8456f0d084c3456d059fd9a92cce667963232cbf763eac3bc5b7940872"},
+]
[package.dependencies]
six = ">=1.6.1,<2.0"
@@ -130,6 +191,9 @@ description = "Atomic file writes."
category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+files = [
+ {file = "atomicwrites-1.4.1.tar.gz", hash = "sha256:81b2c9071a49367a7f770170e5eec8cb66567cfbbc8c73d20ce5ca4a8d71cf11"},
+]
[[package]]
name = "attrs"
@@ -138,12 +202,16 @@ description = "Classes Without Boilerplate"
category = "main"
optional = false
python-versions = ">=3.5"
+files = [
+ {file = "attrs-22.1.0-py2.py3-none-any.whl", hash = "sha256:86efa402f67bf2df34f51a335487cf46b1ec130d02b8d39fd248abfd30da551c"},
+ {file = "attrs-22.1.0.tar.gz", hash = "sha256:29adc2665447e5191d0e7c568fde78b21f9672d344281d0c6e1ab085429b22b6"},
+]
[package.extras]
dev = ["cloudpickle", "coverage[toml] (>=5.0.2)", "furo", "hypothesis", "mypy (>=0.900,!=0.940)", "pre-commit", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "sphinx", "sphinx-notfound-page", "zope.interface"]
docs = ["furo", "sphinx", "sphinx-notfound-page", "zope.interface"]
tests = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy (>=0.900,!=0.940)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "zope.interface"]
-tests_no_zope = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy (>=0.900,!=0.940)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins"]
+tests-no-zope = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy (>=0.900,!=0.940)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins"]
[[package]]
name = "Babel"
@@ -152,6 +220,10 @@ description = "Internationalization utilities"
category = "dev"
optional = false
python-versions = ">=3.6"
+files = [
+ {file = "Babel-2.10.3-py3-none-any.whl", hash = "sha256:ff56f4892c1c4bf0d814575ea23471c230d544203c7748e8c68f0089478d48eb"},
+ {file = "Babel-2.10.3.tar.gz", hash = "sha256:7614553711ee97490f732126dc077f8d0ae084ebc6a96e23db1482afabdb2c51"},
+]
[package.dependencies]
pytz = ">=2015.7"
@@ -163,6 +235,10 @@ description = "Specifications for callback functions passed in to an API"
category = "dev"
optional = false
python-versions = "*"
+files = [
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+ {file = "backcall-0.2.0.tar.gz", hash = "sha256:5cbdbf27be5e7cfadb448baf0aa95508f91f2bbc6c6437cd9cd06e2a4c215e1e"},
+]
[[package]]
name = "beautifulsoup4"
@@ -171,6 +247,10 @@ description = "Screen-scraping library"
category = "dev"
optional = false
python-versions = ">=3.6.0"
+files = [
+ {file = "beautifulsoup4-4.11.1-py3-none-any.whl", hash = "sha256:58d5c3d29f5a36ffeb94f02f0d786cd53014cf9b3b3951d42e0080d8a9498d30"},
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+]
[package.dependencies]
soupsieve = ">1.2"
@@ -186,6 +266,31 @@ description = "The uncompromising code formatter."
category = "dev"
optional = false
python-versions = ">=3.6.2"
+files = [
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click = ">=8.0.0"
@@ -208,6 +313,10 @@ description = "An easy safelist-based HTML-sanitizing tool."
category = "dev"
optional = false
python-versions = ">=3.7"
+files = [
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[package.dependencies]
six = ">=1.9.0"
@@ -224,6 +333,44 @@ description = "Fast NumPy array functions written in C"
category = "main"
optional = false
python-versions = "*"
+files = [
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@@ -2519,6 +4548,10 @@ description = "ANSI color formatting for output in terminal"
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@@ -2530,6 +4563,10 @@ description = "Tornado websocket backend for the Xterm.js Javascript terminal em
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@@ -2546,6 +4583,10 @@ description = "Generate simple tables in terminals from a nested list of strings
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+files = [
{file = "virtualenv-20.16.5-py3-none-any.whl", hash = "sha256:d07dfc5df5e4e0dbc92862350ad87a36ed505b978f6c39609dc489eadd5b0d27"},
{file = "virtualenv-20.16.5.tar.gz", hash = "sha256:227ea1b9994fdc5ea31977ba3383ef296d7472ea85be9d6732e42a91c04e80da"},
]
-wcwidth = [
+
+[package.dependencies]
+distlib = ">=0.3.5,<1"
+filelock = ">=3.4.1,<4"
+platformdirs = ">=2.4,<3"
+
+[package.extras]
+docs = ["proselint (>=0.13)", "sphinx (>=5.1.1)", "sphinx-argparse (>=0.3.1)", "sphinx-rtd-theme (>=1)", "towncrier (>=21.9)"]
+testing = ["coverage (>=6.2)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=21.3)", "pytest (>=7.0.1)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.2)", "pytest-mock (>=3.6.1)", "pytest-randomly (>=3.10.3)", "pytest-timeout (>=2.1)"]
+
+[[package]]
+name = "wcwidth"
+version = "0.2.5"
+description = "Measures the displayed width of unicode strings in a terminal"
+category = "dev"
+optional = false
+python-versions = "*"
+files = [
{file = "wcwidth-0.2.5-py2.py3-none-any.whl", hash = "sha256:beb4802a9cebb9144e99086eff703a642a13d6a0052920003a230f3294bbe784"},
{file = "wcwidth-0.2.5.tar.gz", hash = "sha256:c4d647b99872929fdb7bdcaa4fbe7f01413ed3d98077df798530e5b04f116c83"},
]
-webencodings = [
+
+[[package]]
+name = "webencodings"
+version = "0.5.1"
+description = "Character encoding aliases for legacy web content"
+category = "dev"
+optional = false
+python-versions = "*"
+files = [
{file = "webencodings-0.5.1-py2.py3-none-any.whl", hash = "sha256:a0af1213f3c2226497a97e2b3aa01a7e4bee4f403f95be16fc9acd2947514a78"},
{file = "webencodings-0.5.1.tar.gz", hash = "sha256:b36a1c245f2d304965eb4e0a82848379241dc04b865afcc4aab16748587e1923"},
]
-Werkzeug = [
+
+[[package]]
+name = "Werkzeug"
+version = "2.2.2"
+description = "The comprehensive WSGI web application library."
+category = "main"
+optional = false
+python-versions = ">=3.7"
+files = [
{file = "Werkzeug-2.2.2-py3-none-any.whl", hash = "sha256:f979ab81f58d7318e064e99c4506445d60135ac5cd2e177a2de0089bfd4c9bd5"},
{file = "Werkzeug-2.2.2.tar.gz", hash = "sha256:7ea2d48322cc7c0f8b3a215ed73eabd7b5d75d0b50e31ab006286ccff9e00b8f"},
]
-wheel = [
+
+[package.dependencies]
+MarkupSafe = ">=2.1.1"
+
+[package.extras]
+watchdog = ["watchdog"]
+
+[[package]]
+name = "wheel"
+version = "0.37.1"
+description = "A built-package format for Python"
+category = "main"
+optional = false
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
+files = [
{file = "wheel-0.37.1-py2.py3-none-any.whl", hash = "sha256:4bdcd7d840138086126cd09254dc6195fb4fc6f01c050a1d7236f2630db1d22a"},
{file = "wheel-0.37.1.tar.gz", hash = "sha256:e9a504e793efbca1b8e0e9cb979a249cf4a0a7b5b8c9e8b65a5e39d49529c1c4"},
]
-widgetsnbextension = [
+
+[package.extras]
+test = ["pytest (>=3.0.0)", "pytest-cov"]
+
+[[package]]
+name = "widgetsnbextension"
+version = "4.0.3"
+description = "Jupyter interactive widgets for Jupyter Notebook"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+files = [
{file = "widgetsnbextension-4.0.3-py3-none-any.whl", hash = "sha256:7f3b0de8fda692d31ef03743b598620e31c2668b835edbd3962d080ccecf31eb"},
{file = "widgetsnbextension-4.0.3.tar.gz", hash = "sha256:34824864c062b0b3030ad78210db5ae6a3960dfb61d5b27562d6631774de0286"},
]
-wrapt = [
+
+[[package]]
+name = "wrapt"
+version = "1.14.1"
+description = "Module for decorators, wrappers and monkey patching."
+category = "main"
+optional = false
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
+files = [
{file = "wrapt-1.14.1-cp27-cp27m-macosx_10_9_x86_64.whl", hash = "sha256:1b376b3f4896e7930f1f772ac4b064ac12598d1c38d04907e696cc4d794b43d3"},
{file = "wrapt-1.14.1-cp27-cp27m-manylinux1_i686.whl", hash = "sha256:903500616422a40a98a5a3c4ff4ed9d0066f3b4c951fa286018ecdf0750194ef"},
{file = "wrapt-1.14.1-cp27-cp27m-manylinux1_x86_64.whl", hash = "sha256:5a9a0d155deafd9448baff28c08e150d9b24ff010e899311ddd63c45c2445e28"},
@@ -4943,18 +4951,53 @@ wrapt = [
{file = "wrapt-1.14.1-cp39-cp39-win_amd64.whl", hash = "sha256:dee60e1de1898bde3b238f18340eec6148986da0455d8ba7848d50470a7a32fb"},
{file = "wrapt-1.14.1.tar.gz", hash = "sha256:380a85cf89e0e69b7cfbe2ea9f765f004ff419f34194018a6827ac0e3edfed4d"},
]
-xgboost = [
+
+[[package]]
+name = "xgboost"
+version = "1.4.2"
+description = "XGBoost Python Package"
+category = "main"
+optional = false
+python-versions = ">=3.6"
+files = [
{file = "xgboost-1.4.2-py3-none-macosx_10_14_x86_64.macosx_10_15_x86_64.macosx_11_0_x86_64.whl", hash = "sha256:e8f1a366a403784afd30a56eb99a429cefc45d906943cd362025ccf942208e13"},
{file = "xgboost-1.4.2-py3-none-manylinux2010_x86_64.whl", hash = "sha256:ec3f60d53dcd23273a5c7a495ba0f8205656ce750eb2ce7798726a4b2ef4955a"},
{file = "xgboost-1.4.2-py3-none-manylinux2014_aarch64.whl", hash = "sha256:15dd5987827030b3f68e741490a8b3a4ead7c6064bd911e36235b84e0a9d0765"},
{file = "xgboost-1.4.2-py3-none-win_amd64.whl", hash = "sha256:7c8973204b2c2362012850605e81de5a180513fc08db36d0da9befb77c3d57c8"},
{file = "xgboost-1.4.2.tar.gz", hash = "sha256:5a364c152095824445ac56a83fb7f7e75913b4bb128c2fcd99b85877c9f4f8fe"},
]
-xmltodict = [
+
+[package.dependencies]
+numpy = "*"
+scipy = "*"
+
+[package.extras]
+dask = ["dask", "distributed", "pandas"]
+datatable = ["datatable"]
+pandas = ["pandas"]
+plotting = ["graphviz", "matplotlib"]
+scikit-learn = ["scikit-learn"]
+
+[[package]]
+name = "xmltodict"
+version = "0.13.0"
+description = "Makes working with XML feel like you are working with JSON"
+category = "main"
+optional = false
+python-versions = ">=3.4"
+files = [
{file = "xmltodict-0.13.0-py2.py3-none-any.whl", hash = "sha256:aa89e8fd76320154a40d19a0df04a4695fb9dc5ba977cbb68ab3e4eb225e7852"},
{file = "xmltodict-0.13.0.tar.gz", hash = "sha256:341595a488e3e01a85a9d8911d8912fd922ede5fecc4dce437eb4b6c8d037e56"},
]
-zeroc-ice = [
+
+[[package]]
+name = "zeroc-ice"
+version = "3.6.5"
+description = "Ice is a comprehensive RPC framework with support for Python, C++, .NET, Java, JavaScript and more."
+category = "main"
+optional = true
+python-versions = "*"
+files = [
{file = "zeroc-ice-3.6.5.tar.gz", hash = "sha256:4235ffeb605bcd4e22e716577f7d61e4aa1bc82f65276bb542701a81b7933356"},
{file = "zeroc_ice-3.6.5-cp27-cp27m-macosx_10_14_x86_64.whl", hash = "sha256:9d13ed4130683726d9741e1f6789e7b977b14ad3aa39d23ffaa798bbf9e8f11b"},
{file = "zeroc_ice-3.6.5-cp27-cp27m-win32.whl", hash = "sha256:514e602f9e8d0c7f4cf1a3777fbc357e11323e5ab1bfa169edd6d76118e76920"},
@@ -4963,7 +5006,28 @@ zeroc-ice = [
{file = "zeroc_ice-3.6.5-cp37-cp37m-win32.whl", hash = "sha256:b9d9e00e2ee649971e3615752531d73577daedbc8a0ac04178727651f1ed4fa2"},
{file = "zeroc_ice-3.6.5-cp37-cp37m-win_amd64.whl", hash = "sha256:cdc4c68111dfe3542287ca6d41d2ad7ee22d8806cf6231f124769c60351d636c"},
]
-zipp = [
+
+[[package]]
+name = "zipp"
+version = "3.8.1"
+description = "Backport of pathlib-compatible object wrapper for zip files"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+files = [
{file = "zipp-3.8.1-py3-none-any.whl", hash = "sha256:47c40d7fe183a6f21403a199b3e4192cca5774656965b0a4988ad2f8feb5f009"},
{file = "zipp-3.8.1.tar.gz", hash = "sha256:05b45f1ee8f807d0cc928485ca40a07cb491cf092ff587c0df9cb1fd154848d2"},
]
+
+[package.extras]
+docs = ["jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx"]
+testing = ["func-timeout", "jaraco.itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"]
+
+[extras]
+network = ["omero-py", "zeroc-ice"]
+omero = ["omero-py"]
+
+[metadata]
+lock-version = "2.0"
+python-versions = ">=3.8, <3.11"
+content-hash = "309871c83333d2fef9611b689ae079565c398e78adac2910f6fcc7986784f7f8"
diff --git a/pyproject.toml b/pyproject.toml
index 7d66bc91dae0f005350d97f0033012a5752cf17e..2c75145dc9fd514490a5567b8beda3ddfd201baf 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -66,6 +66,7 @@ pyright = "^1.1.258"
pre-commit = "^2.20.0"
seaborn = "^0.11.2"
debugpy = "^1.6.3"
+coverage = "^7.0.4"
# [tool.poetry.group.gui.dependencies]
# napari = ">=0.4.16"