diff --git a/src/aliby/pipeline.py b/src/aliby/pipeline.py index 81bbba09071ce6e38c8dbcfcc065a487e2ed0835..9343304b1338e99a8ec8b241c0f9b7a744c20946 100644 --- a/src/aliby/pipeline.py +++ b/src/aliby/pipeline.py @@ -15,6 +15,9 @@ from typing import Union import h5py import numpy as np import pandas as pd +from pathos.multiprocessing import Pool +from tqdm import tqdm + from agora.abc import ParametersABC, ProcessABC from agora.io.metadata import MetaData, parse_logfiles from agora.io.reader import StateReader @@ -24,10 +27,6 @@ from agora.io.writer import ( # BabyWriter, StateWriter, TilerWriter, ) -from pathos.multiprocessing import Pool -from postprocessor.core.processor import PostProcessor, PostProcessorParameters -from tqdm import tqdm - from aliby.baby_client import BabyParameters, BabyRunner from aliby.haystack import initialise_tf from aliby.io.dataset import Dataset, DatasetLocal @@ -35,6 +34,7 @@ from aliby.io.image import get_image_class from aliby.tile.tiler import Tiler, TilerParameters from extraction.core.extractor import Extractor, ExtractorParameters from extraction.core.functions.defaults import exparams_from_meta +from postprocessor.core.processor import PostProcessor, PostProcessorParameters # from postprocessor.compiler import ExperimentCompiler, PageOrganiser