From c0debe3e687b975b6eb5aa6e3683b381474d1a76 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Al=C3=A1n=20Mu=C3=B1oz?= <alan.munoz@ed.ac.uk>
Date: Sat, 7 Jan 2023 00:37:03 +0000
Subject: [PATCH] [WIP]feat(extraction): support metaless channels
---
src/extraction/core/functions/defaults.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/extraction/core/functions/defaults.py b/src/extraction/core/functions/defaults.py
index 5d57dc62..84798680 100644
--- a/src/extraction/core/functions/defaults.py
+++ b/src/extraction/core/functions/defaults.py
@@ -55,7 +55,7 @@ def exparams_from_meta(
extant_fluorescence_ch = []
for av_channel in candidate_channels:
# Find channels in metadata whose names match
- found_channel = find_channel_name(meta["channels"], av_channel)
+ found_channel = find_channel_name(meta.get("channels", []), av_channel)
if found_channel is not None:
extant_fluorescence_ch.append(found_channel)
--
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