From cd1b134e5a991539746c8621e8e55ced7b196ede Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Al=C3=A1n=20Mu=C3=B1oz?= <amuoz@ed.ac.uk>
Date: Mon, 28 Mar 2022 13:29:15 +0100
Subject: [PATCH] outcomment extraction nucestconv
---
extraction/core/functions/defaults.py | 3 +++
1 file changed, 3 insertions(+)
diff --git a/extraction/core/functions/defaults.py b/extraction/core/functions/defaults.py
index b7e67bcc..704536fc 100644
--- a/extraction/core/functions/defaults.py
+++ b/extraction/core/functions/defaults.py
@@ -35,8 +35,11 @@ def exparams_from_meta(meta: Union[dict, PosixPath, str], extras=["ph"]):
"max2p5pc_med",
"max5px",
"max5px_med",
+ # "nuc_est_conv",
}
+
default_rm = {r: default_metrics for r in default_reductions}
+ # default_rm["None"] = ["nuc_conv_3d"]
av_flch = av_channels.intersection(meta["channels/channel"]).difference(
{"Brightfield", "DIC", "BrightfieldGFP"}
--
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