diff --git a/poetry.lock b/poetry.lock
index 006e38ba296c49ca23be3be5ed3c48886fab9e01..e222acd83ada8f29aa7b280d0f5585214623603d 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -92,7 +92,7 @@ scipy = ">=1.7.3"
 
 [[package]]
 name = "aliby-baby"
-version = "0.1.8"
+version = "0.1.9"
 description = "Birth Annotator for Budding Yeast"
 category = "main"
 optional = false
@@ -103,13 +103,13 @@ colorama = ">=0.4.4,<0.5.0"
 imageio = "2.8.0"
 keras-tuner = "1.0.1"
 matplotlib = ">=3.5.1,<4.0.0"
-numpy = ">=1.16.0,<2.0.0"
-pandas = ">=1.1.4"
+numpy = ">=1.21.6,<2.0.0"
+pandas = "1.3.3"
 Pillow = ">=9.0.0,<10.0.0"
 ray = {version = "1.4.0", extras = ["tune"]}
 scikit-image = ">=0.17.1,<=0.19.0"
 scikit-learn = "0.22.2.post1"
-tensorflow = "2.1.4"
+tensorflow = ">=2.0.0"
 tqdm = ">=4.62.3,<5.0.0"
 tune-sklearn = ">=0.4.1,<0.5.0"
 xgboost = "1.4.2"
@@ -146,12 +146,15 @@ optional = false
 python-versions = "*"
 
 [[package]]
-name = "astor"
-version = "0.8.1"
-description = "Read/rewrite/write Python ASTs"
+name = "astunparse"
+version = "1.6.3"
+description = "An AST unparser for Python"
 category = "main"
 optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7"
+python-versions = "*"
+
+[package.dependencies]
+six = ">=1.6.1,<2.0"
 
 [[package]]
 name = "async-timeout"
@@ -196,7 +199,7 @@ tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>
 
 [[package]]
 name = "babel"
-version = "2.10.1"
+version = "2.10.2"
 description = "Internationalization utilities"
 category = "dev"
 optional = false
@@ -241,11 +244,11 @@ six = "*"
 
 [[package]]
 name = "cachetools"
-version = "4.2.4"
+version = "5.2.0"
 description = "Extensible memoizing collections and decorators"
 category = "main"
 optional = false
-python-versions = "~=3.5"
+python-versions = "~=3.7"
 
 [[package]]
 name = "catch22"
@@ -334,17 +337,6 @@ diagnostics = ["bokeh (>=2.1.1)", "jinja2"]
 distributed = ["distributed (==2021.12.0)"]
 test = ["pytest", "pytest-rerunfailures", "pytest-xdist", "pre-commit"]
 
-[[package]]
-name = "data-science-types"
-version = "0.2.23"
-description = "Type stubs for Python machine learning libraries"
-category = "dev"
-optional = false
-python-versions = ">=3.6"
-
-[package.extras]
-dev = ["black", "flake8", "flake8-pyi", "matplotlib", "mypy (==0.770)", "numpy", "pandas", "pytest"]
-
 [[package]]
 name = "deprecated"
 version = "1.2.13"
@@ -390,6 +382,14 @@ python-versions = ">=3.7"
 docs = ["furo (>=2021.8.17b43)", "sphinx (>=4.1)", "sphinx-autodoc-typehints (>=1.12)"]
 testing = ["covdefaults (>=1.2.0)", "coverage (>=4)", "pytest (>=4)", "pytest-cov", "pytest-timeout (>=1.4.2)"]
 
+[[package]]
+name = "flatbuffers"
+version = "1.12"
+description = "The FlatBuffers serialization format for Python"
+category = "main"
+optional = false
+python-versions = "*"
+
 [[package]]
 name = "fonttools"
 version = "4.33.3"
@@ -461,7 +461,7 @@ python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 
 [[package]]
 name = "gast"
-version = "0.2.2"
+version = "0.4.0"
 description = "Python AST that abstracts the underlying Python version"
 category = "main"
 optional = false
@@ -482,7 +482,7 @@ scipy = ">=1.7.3,<2.0.0"
 
 [[package]]
 name = "google-api-core"
-version = "2.8.0"
+version = "2.8.1"
 description = "Google API client core library"
 category = "main"
 optional = false
@@ -490,31 +490,32 @@ python-versions = ">=3.6"
 
 [package.dependencies]
 google-auth = ">=1.25.0,<3.0dev"
-googleapis-common-protos = ">=1.52.0,<2.0dev"
-protobuf = ">=3.12.0"
+googleapis-common-protos = ">=1.56.2,<2.0dev"
+protobuf = ">=3.15.0,<4.0.0dev"
 requests = ">=2.18.0,<3.0.0dev"
 
 [package.extras]
 grpc = ["grpcio (>=1.33.2,<2.0dev)", "grpcio-status (>=1.33.2,<2.0dev)"]
-grpcgcp = ["grpcio-gcp (>=0.2.2)"]
-grpcio-gcp = ["grpcio-gcp (>=0.2.2)"]
+grpcgcp = ["grpcio-gcp (>=0.2.2,<1.0dev)"]
+grpcio-gcp = ["grpcio-gcp (>=0.2.2,<1.0dev)"]
 
 [[package]]
 name = "google-auth"
-version = "1.35.0"
+version = "2.8.0"
 description = "Google Authentication Library"
 category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*"
 
 [package.dependencies]
-cachetools = ">=2.0.0,<5.0"
+cachetools = ">=2.0.0,<6.0"
 pyasn1-modules = ">=0.2.1"
 rsa = {version = ">=3.1.4,<5", markers = "python_version >= \"3.6\""}
 six = ">=1.9.0"
 
 [package.extras]
 aiohttp = ["requests (>=2.20.0,<3.0.0dev)", "aiohttp (>=3.6.2,<4.0.0dev)"]
+enterprise_cert = ["cryptography (==36.0.2)", "pyopenssl (==22.0.0)"]
 pyopenssl = ["pyopenssl (>=20.0.0)"]
 reauth = ["pyu2f (>=0.1.5)"]
 
@@ -546,17 +547,17 @@ six = "*"
 
 [[package]]
 name = "googleapis-common-protos"
-version = "1.56.1"
+version = "1.56.2"
 description = "Common protobufs used in Google APIs"
 category = "main"
 optional = false
 python-versions = ">=3.6"
 
 [package.dependencies]
-protobuf = ">=3.15.0"
+protobuf = ">=3.15.0,<4.0.0dev"
 
 [package.extras]
-grpc = ["grpcio (>=1.0.0)"]
+grpc = ["grpcio (>=1.0.0,<2.0.0dev)"]
 
 [[package]]
 name = "gpustat"
@@ -611,7 +612,7 @@ python-versions = ">=3.5"
 
 [[package]]
 name = "igraph"
-version = "0.9.10"
+version = "0.9.11"
 description = "High performance graph data structures and algorithms"
 category = "main"
 optional = false
@@ -623,7 +624,8 @@ texttable = ">=1.6.2"
 [package.extras]
 doc = ["Sphinx (>=4.2.0)", "sphinxbootstrap4theme (>=0.6.0)"]
 plotting = ["cairocffi (>=1.2.0)"]
-test = ["networkx (>=2.5)", "pytest (>=6.2.5)", "numpy (>=1.19.0)", "pandas (>=1.1.0)", "scipy (>=1.5.0)"]
+test = ["networkx (>=2.5)", "pytest (>=7.0.1)", "numpy (>=1.19.0)", "pandas (>=1.1.0)", "scipy (>=1.5.0)"]
+test-musl = ["networkx (>=2.5)", "pytest (>=7.0.1)"]
 
 [[package]]
 name = "imageio"
@@ -734,23 +736,16 @@ format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validat
 format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
 
 [[package]]
-name = "keras-applications"
-version = "1.0.8"
-description = "Reference implementations of popular deep learning models"
+name = "keras"
+version = "2.9.0"
+description = "Deep learning for humans."
 category = "main"
 optional = false
 python-versions = "*"
 
-[package.dependencies]
-h5py = "*"
-numpy = ">=1.9.1"
-
-[package.extras]
-tests = ["pytest", "pytest-pep8", "pytest-xdist", "pytest-cov"]
-
 [[package]]
 name = "keras-preprocessing"
-version = "1.1.0"
+version = "1.1.2"
 description = "Easy data preprocessing and data augmentation for deep learning models"
 category = "main"
 optional = false
@@ -763,7 +758,7 @@ six = ">=1.9.0"
 [package.extras]
 image = ["scipy (>=0.14)", "Pillow (>=5.2.0)"]
 pep8 = ["flake8"]
-tests = ["pandas", "pillow", "tensorflow (==1.7)", "keras", "pytest", "pytest-xdist", "pytest-cov"]
+tests = ["pandas", "pillow", "tensorflow", "keras", "pytest", "pytest-xdist", "pytest-cov"]
 
 [[package]]
 name = "keras-tuner"
@@ -789,7 +784,7 @@ tests = ["pytest", "flake8", "mock", "portpicker", "pytest-xdist", "pytest-cov"]
 
 [[package]]
 name = "kiwisolver"
-version = "1.4.2"
+version = "1.4.3"
 description = "A fast implementation of the Cassowary constraint solver"
 category = "main"
 optional = false
@@ -809,6 +804,14 @@ python-versions = "*"
 [package.dependencies]
 igraph = ">=0.9.0,<0.10"
 
+[[package]]
+name = "libclang"
+version = "14.0.1"
+description = "Clang Python Bindings, mirrored from the official LLVM repo: https://github.com/llvm/llvm-project/tree/main/clang/bindings/python, to make the installation process easier."
+category = "main"
+optional = false
+python-versions = "*"
+
 [[package]]
 name = "locket"
 version = "1.0.0"
@@ -936,15 +939,15 @@ test = ["pytest (>=6.2)", "pytest-cov (>=2.12)", "codecov (>=2.1)"]
 
 [[package]]
 name = "numpy"
-version = "1.18.5"
+version = "1.21.6"
 description = "NumPy is the fundamental package for array computing with Python."
 category = "main"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.7,<3.11"
 
 [[package]]
 name = "numpydoc"
-version = "1.3.1"
+version = "1.4.0"
 description = "Sphinx extension to support docstrings in Numpy format"
 category = "dev"
 optional = false
@@ -1016,31 +1019,6 @@ category = "main"
 optional = false
 python-versions = "*"
 
-[[package]]
-name = "opencv-python"
-version = "4.5.2.54"
-description = "Wrapper package for OpenCV python bindings."
-category = "main"
-optional = false
-python-versions = ">=3.6"
-
-[package.dependencies]
-numpy = ">=1.13.3"
-
-[[package]]
-name = "opencv-python"
-version = "4.5.5.64"
-description = "Wrapper package for OpenCV python bindings."
-category = "main"
-optional = false
-python-versions = ">=3.6"
-
-[package.dependencies]
-numpy = [
-    {version = ">=1.14.5", markers = "python_version >= \"3.7\""},
-    {version = ">=1.17.3", markers = "python_version >= \"3.8\""},
-]
-
 [[package]]
 name = "opencv-python"
 version = "4.6.0.66"
@@ -1051,6 +1029,8 @@ python-versions = ">=3.6"
 
 [package.dependencies]
 numpy = [
+    {version = ">=1.21.2", markers = "python_version >= \"3.10\" or python_version >= \"3.6\" and platform_system == \"Darwin\" and platform_machine == \"arm64\""},
+    {version = ">=1.19.3", markers = "python_version >= \"3.6\" and platform_system == \"Linux\" and platform_machine == \"aarch64\" or python_version >= \"3.9\""},
     {version = ">=1.14.5", markers = "python_version >= \"3.7\""},
     {version = ">=1.17.3", markers = "python_version >= \"3.8\""},
 ]
@@ -1110,38 +1090,6 @@ pytz = ">=2017.3"
 [package.extras]
 test = ["hypothesis (>=3.58)", "pytest (>=6.0)", "pytest-xdist"]
 
-[[package]]
-name = "pandas"
-version = "1.3.4"
-description = "Powerful data structures for data analysis, time series, and statistics"
-category = "main"
-optional = false
-python-versions = ">=3.7.1"
-
-[package.dependencies]
-numpy = {version = ">=1.17.3", markers = "platform_machine != \"aarch64\" and platform_machine != \"arm64\" and python_version < \"3.10\""}
-python-dateutil = ">=2.7.3"
-pytz = ">=2017.3"
-
-[package.extras]
-test = ["hypothesis (>=3.58)", "pytest (>=6.0)", "pytest-xdist"]
-
-[[package]]
-name = "pandas"
-version = "1.3.5"
-description = "Powerful data structures for data analysis, time series, and statistics"
-category = "main"
-optional = false
-python-versions = ">=3.7.1"
-
-[package.dependencies]
-numpy = {version = ">=1.17.3", markers = "platform_machine != \"aarch64\" and platform_machine != \"arm64\" and python_version < \"3.10\""}
-python-dateutil = ">=2.7.3"
-pytz = ">=2017.3"
-
-[package.extras]
-test = ["hypothesis (>=3.58)", "pytest (>=6.0)", "pytest-xdist"]
-
 [[package]]
 name = "partd"
 version = "1.2.0"
@@ -1253,8 +1201,8 @@ twisted = ["twisted"]
 
 [[package]]
 name = "protobuf"
-version = "4.21.1"
-description = ""
+version = "3.20.1"
+description = "Protocol Buffers"
 category = "main"
 optional = false
 python-versions = ">=3.7"
@@ -1488,20 +1436,20 @@ ocsp = ["cryptography (>=36.0.1)", "pyopenssl (==20.0.1)", "requests (>=2.26.0)"
 
 [[package]]
 name = "requests"
-version = "2.27.1"
+version = "2.28.0"
 description = "Python HTTP for Humans."
 category = "main"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
+python-versions = ">=3.7, <4"
 
 [package.dependencies]
 certifi = ">=2017.4.17"
-charset-normalizer = {version = ">=2.0.0,<2.1.0", markers = "python_version >= \"3\""}
-idna = {version = ">=2.5,<4", markers = "python_version >= \"3\""}
+charset-normalizer = ">=2.0.0,<2.1.0"
+idna = ">=2.5,<4"
 urllib3 = ">=1.21.1,<1.27"
 
 [package.extras]
-socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"]
+socks = ["PySocks (>=1.5.6,!=1.5.7)"]
 use_chardet_on_py3 = ["chardet (>=3.0.2,<5)"]
 
 [[package]]
@@ -1754,27 +1702,44 @@ widechars = ["wcwidth"]
 
 [[package]]
 name = "tensorboard"
-version = "2.1.1"
+version = "2.9.0"
 description = "TensorBoard lets you watch Tensors Flow"
 category = "main"
 optional = false
-python-versions = ">= 2.7, != 3.0.*, != 3.1.*"
+python-versions = ">=3.6"
 
 [package.dependencies]
 absl-py = ">=0.4"
-google-auth = ">=1.6.3,<2"
+google-auth = ">=1.6.3,<3"
 google-auth-oauthlib = ">=0.4.1,<0.5"
 grpcio = ">=1.24.3"
 markdown = ">=2.6.8"
 numpy = ">=1.12.0"
-protobuf = ">=3.6.0"
+protobuf = ">=3.9.2"
 requests = ">=2.21.0,<3"
-six = ">=1.10.0"
-werkzeug = ">=0.11.15"
+tensorboard-data-server = ">=0.6.0,<0.7.0"
+tensorboard-plugin-wit = ">=1.6.0"
+werkzeug = ">=1.0.1"
+
+[[package]]
+name = "tensorboard-data-server"
+version = "0.6.1"
+description = "Fast data loading for TensorBoard"
+category = "main"
+optional = false
+python-versions = ">=3.6"
+
+[[package]]
+name = "tensorboard-plugin-wit"
+version = "1.8.1"
+description = "What-If Tool TensorBoard plugin."
+category = "main"
+optional = false
+python-versions = "*"
 
 [[package]]
 name = "tensorboardx"
-version = "2.5"
+version = "2.5.1"
 description = "TensorBoardX lets you watch Tensors Flow without Tensorflow"
 category = "main"
 optional = false
@@ -1782,42 +1747,61 @@ python-versions = "*"
 
 [package.dependencies]
 numpy = "*"
-protobuf = ">=3.8.0"
-six = "*"
+protobuf = ">=3.8.0,<=3.20.1"
 
 [[package]]
 name = "tensorflow"
-version = "2.1.4"
+version = "2.9.0"
 description = "TensorFlow is an open source machine learning framework for everyone."
 category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.7"
 
 [package.dependencies]
-absl-py = ">=0.7.0"
-astor = ">=0.6.0"
-gast = "0.2.2"
-google-pasta = ">=0.1.6"
-grpcio = ">=1.8.6"
-h5py = "<=2.10.0"
-keras-applications = ">=1.0.8"
-keras-preprocessing = "1.1.0"
-numpy = ">=1.16.0,<1.19.0"
+absl-py = ">=1.0.0"
+astunparse = ">=1.6.0"
+flatbuffers = ">=1.12,<2"
+gast = ">=0.2.1,<=0.4.0"
+google-pasta = ">=0.1.1"
+grpcio = ">=1.24.3,<2.0"
+h5py = ">=2.9.0"
+keras = ">=2.9.0rc0,<2.10.0"
+keras-preprocessing = ">=1.1.1"
+libclang = ">=13.0.0"
+numpy = ">=1.20"
 opt-einsum = ">=2.3.2"
-protobuf = ">=3.8.0"
+packaging = "*"
+protobuf = ">=3.9.2"
 six = ">=1.12.0"
-tensorboard = ">=2.1.0,<2.2.0"
-tensorflow-estimator = ">=2.1.0rc0,<2.2.0"
+tensorboard = ">=2.9,<2.10"
+tensorflow-estimator = ">=2.9.0rc0,<2.10.0"
+tensorflow-io-gcs-filesystem = ">=0.23.1"
 termcolor = ">=1.1.0"
-wrapt = ">=1.11.1"
+typing-extensions = ">=3.6.6"
+wrapt = ">=1.11.0"
 
 [[package]]
 name = "tensorflow-estimator"
-version = "2.1.0"
+version = "2.9.0"
 description = "TensorFlow Estimator."
 category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.7"
+
+[[package]]
+name = "tensorflow-io-gcs-filesystem"
+version = "0.26.0"
+description = "TensorFlow IO"
+category = "main"
+optional = false
+python-versions = ">=3.7, <3.11"
+
+[package.extras]
+tensorflow = ["tensorflow (>=2.9.0,<2.10.0)"]
+tensorflow-aarch64 = ["tensorflow-aarch64 (>=2.9.0,<2.10.0)"]
+tensorflow-cpu = ["tensorflow-cpu (>=2.9.0,<2.10.0)"]
+tensorflow-gpu = ["tensorflow-gpu (>=2.9.0,<2.10.0)"]
+tensorflow-rocm = ["tensorflow-rocm (>=2.9.0,<2.10.0)"]
 
 [[package]]
 name = "termcolor"
@@ -2023,7 +2007,7 @@ testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-
 [metadata]
 lock-version = "1.1"
 python-versions = ">=3.7.1,<3.11"
-content-hash = "f27c5b329b58c94f2af4fe0be540f3be833b4db0ce50059af982d25bcc46476c"
+content-hash = "090a627ee0f3ae896e04bd7835211beea28b812f6c64153065e00df8ce773975"
 
 [metadata.files]
 absl-py = [
@@ -2125,8 +2109,8 @@ aliby-agora = [
     {file = "aliby_agora-0.2.28-py3-none-any.whl", hash = "sha256:54219b605e368a6ff883859c88e064009118653bac95b967e02750dbabf4ceb3"},
 ]
 aliby-baby = [
-    {file = "aliby-baby-0.1.8.tar.gz", hash = "sha256:edd9773040bc80640dd1aab0ec87e1f2eb043232beb1b819274f2f915958520a"},
-    {file = "aliby_baby-0.1.8-py3-none-any.whl", hash = "sha256:21c7c46f5da719f03f3657b31e6112953e97236a9e5e69537cdde75a4be338f4"},
+    {file = "aliby-baby-0.1.9.tar.gz", hash = "sha256:d1f80d8187ae586ed037cba2f34af1b28c9e989075a4552d3ed93b402099144b"},
+    {file = "aliby_baby-0.1.9-py3-none-any.whl", hash = "sha256:c5690556693e0404b54eb37f589ae3240d173119e6abc938a55f173daaf43105"},
 ]
 aliby-post = [
     {file = "aliby-post-0.1.27.tar.gz", hash = "sha256:77f8763be9892b702483739f2abd84e2d4c1f568d60b03c93ba6400e6f69f464"},
@@ -2136,9 +2120,9 @@ appdirs = [
     {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"},
     {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"},
 ]
-astor = [
-    {file = "astor-0.8.1-py2.py3-none-any.whl", hash = "sha256:070a54e890cefb5b3739d19f30f5a5ec840ffc9c50ffa7d23cc9fc1a38ebbfc5"},
-    {file = "astor-0.8.1.tar.gz", hash = "sha256:6a6effda93f4e1ce9f618779b2dd1d9d84f1e32812c23a29b3fff6fd7f63fa5e"},
+astunparse = [
+    {file = "astunparse-1.6.3-py2.py3-none-any.whl", hash = "sha256:c2652417f2c8b5bb325c885ae329bdf3f86424075c4fd1a128674bc6fba4b8e8"},
+    {file = "astunparse-1.6.3.tar.gz", hash = "sha256:5ad93a8456f0d084c3456d059fd9a92cce667963232cbf763eac3bc5b7940872"},
 ]
 async-timeout = [
     {file = "async-timeout-4.0.2.tar.gz", hash = "sha256:2163e1640ddb52b7a8c80d0a67a08587e5d245cc9c553a74a847056bc2976b15"},
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 termcolor = [
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diff --git a/pyproject.toml b/pyproject.toml
index f4cebaee6d7e539364d8b23352bd5858385eb07b..df80eb507ddee1492bf3a42d8b1041c5da322245 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -11,7 +11,8 @@ readme = "README.md"
 
 [tool.poetry.dependencies]
 python = ">=3.7.1,<3.11"
-numpy = "^1.16.0"
+numpy = "1.21.6" # Pinning numpy and pandas makes dep resolution much faster
+pandas = "1.3.3"
 dask = "^2021.12.0"
 pathos = "^0.2.8"
 tqdm = "^4.62.3"
@@ -25,14 +26,15 @@ imageio = "2.8.0"
 omero-py = ">=5.6.2"
 zeroc-ice = "3.6.5"
 aliby-agora = "^0.2.28"
-aliby-baby = "^0.1.7"
+aliby-baby = "^0.1.9"
 aliby-post = "^0.1.26"
 p-tqdm = "^1.3.3"
 xmltodict = "^0.13.0"
+protobuf = "<=3.20.1" # For pytest to work
 
 
 [tool.poetry.dev-dependencies]
-data-science-types = "^0.2.23"
+# data-science-types = "^0.2.23"
 black = "^22.3.0"
 Sphinx = "^4.3.2"
 pytest = "^6.2.5"