diff --git a/poetry.lock b/poetry.lock
index 4ca5371c3967a406b60247442c1153c8181ed0a6..3b80b90a3fed74e810378622c33f4a290147cc11 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -2,7 +2,7 @@
 name = "absl-py"
 version = "1.2.0"
 description = "Abseil Python Common Libraries, see https://github.com/abseil/abseil-py."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -10,7 +10,7 @@ python-versions = ">=3.6"
 name = "aiosignal"
 version = "1.2.0"
 description = "aiosignal: a list of registered asynchronous callbacks"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -25,28 +25,11 @@ category = "dev"
 optional = false
 python-versions = "*"
 
-[[package]]
-name = "aliby-agora"
-version = "0.2.33"
-description = "A gathering of shared utilities for the Swain Lab image processing pipeline."
-category = "dev"
-optional = false
-python-versions = ">=3.7.1,<3.11"
-
-[package.dependencies]
-h5py = "2.10"
-numpy = "1.21.6"
-opencv-python = "*"
-pandas = "1.3.3"
-py-find-1st = ">=1.1.5,<2.0.0"
-PyYAML = ">=6.0,<7.0"
-scipy = ">=1.7.3"
-
 [[package]]
 name = "aliby-baby"
 version = "0.1.14"
 description = "Birth Annotator for Budding Yeast"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7.1,<3.11"
 
@@ -67,29 +50,6 @@ tqdm = ">=4.62.3,<5.0.0"
 tune-sklearn = ">=0.4.1,<0.5.0"
 xgboost = "1.4.2"
 
-[[package]]
-name = "aliby-post"
-version = "0.1.36"
-description = "Post-processing tools for aliby pipeline."
-category = "dev"
-optional = false
-python-versions = ">=3.7.1,<3.11"
-
-[package.dependencies]
-aliby-agora = ">=0.2.33,<0.3.0"
-gaussianprocessderivatives = ">=0.1.2,<0.2.0"
-leidenalg = ">=0.8.8,<0.9.0"
-more-itertools = ">=8.12.0,<9.0.0"
-numpy = "1.21.6"
-p-tqdm = ">=1.3.3,<2.0.0"
-pandas = "1.3.3"
-pathos = ">=0.2.8,<0.3.0"
-pycatch22 = ">=0.4.2,<0.5.0"
-PyYAML = ">=6.0,<7.0"
-scikit-learn = ">=0.22"
-scipy = ">=1.4.1"
-seaborn = ">=0.11.2,<0.12.0"
-
 [[package]]
 name = "appdirs"
 version = "1.4.4"
@@ -106,11 +66,56 @@ category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "argon2-cffi"
+version = "21.3.0"
+description = "The secure Argon2 password hashing algorithm."
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[package.dependencies]
+argon2-cffi-bindings = "*"
+
+[package.extras]
+dev = ["cogapp", "coverage[toml] (>=5.0.2)", "furo", "hypothesis", "pre-commit", "pytest", "sphinx", "sphinx-notfound-page", "tomli"]
+docs = ["furo", "sphinx", "sphinx-notfound-page"]
+tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pytest"]
+
+[[package]]
+name = "argon2-cffi-bindings"
+version = "21.2.0"
+description = "Low-level CFFI bindings for Argon2"
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[package.dependencies]
+cffi = ">=1.0.1"
+
+[package.extras]
+dev = ["cogapp", "pre-commit", "pytest", "wheel"]
+tests = ["pytest"]
+
+[[package]]
+name = "asttokens"
+version = "2.0.8"
+description = "Annotate AST trees with source code positions"
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.dependencies]
+six = "*"
+
+[package.extras]
+test = ["astroid (<=2.5.3)", "pytest"]
+
 [[package]]
 name = "astunparse"
 version = "1.6.3"
 description = "An AST unparser for Python"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -130,7 +135,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 name = "attrs"
 version = "22.1.0"
 description = "Classes Without Boilerplate"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.5"
 
@@ -141,7 +146,7 @@ tests = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy (>=0.900
 tests_no_zope = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy (>=0.900,!=0.940)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins"]
 
 [[package]]
-name = "babel"
+name = "Babel"
 version = "2.10.3"
 description = "Internationalization utilities"
 category = "dev"
@@ -159,6 +164,59 @@ category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "beautifulsoup4"
+version = "4.11.1"
+description = "Screen-scraping library"
+category = "dev"
+optional = false
+python-versions = ">=3.6.0"
+
+[package.dependencies]
+soupsieve = ">1.2"
+
+[package.extras]
+html5lib = ["html5lib"]
+lxml = ["lxml"]
+
+[[package]]
+name = "black"
+version = "22.8.0"
+description = "The uncompromising code formatter."
+category = "dev"
+optional = false
+python-versions = ">=3.6.2"
+
+[package.dependencies]
+click = ">=8.0.0"
+mypy-extensions = ">=0.4.3"
+pathspec = ">=0.9.0"
+platformdirs = ">=2"
+tomli = {version = ">=1.1.0", markers = "python_full_version < \"3.11.0a7\""}
+typing-extensions = {version = ">=3.10.0.0", markers = "python_version < \"3.10\""}
+
+[package.extras]
+colorama = ["colorama (>=0.4.3)"]
+d = ["aiohttp (>=3.7.4)"]
+jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
+uvloop = ["uvloop (>=0.15.2)"]
+
+[[package]]
+name = "bleach"
+version = "5.0.1"
+description = "An easy safelist-based HTML-sanitizing tool."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+six = ">=1.9.0"
+webencodings = "*"
+
+[package.extras]
+css = ["tinycss2 (>=1.1.0,<1.2)"]
+dev = ["Sphinx (==4.3.2)", "black (==22.3.0)", "build (==0.8.0)", "flake8 (==4.0.1)", "hashin (==0.17.0)", "mypy (==0.961)", "pip-tools (==6.6.2)", "pytest (==7.1.2)", "tox (==3.25.0)", "twine (==4.0.1)", "wheel (==0.37.1)"]
+
 [[package]]
 name = "build"
 version = "0.8.0"
@@ -183,7 +241,7 @@ virtualenv = ["virtualenv (>=20.0.35)"]
 name = "cachetools"
 version = "5.2.0"
 description = "Extensible memoizing collections and decorators"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "~=3.7"
 
@@ -200,9 +258,9 @@ heapdict = "*"
 
 [[package]]
 name = "certifi"
-version = "2022.6.15"
+version = "2022.9.14"
 description = "Python package for providing Mozilla's CA Bundle."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -217,11 +275,19 @@ python-versions = "*"
 [package.dependencies]
 pycparser = "*"
 
+[[package]]
+name = "cfgv"
+version = "3.3.1"
+description = "Validate configuration and produce human readable error messages."
+category = "dev"
+optional = false
+python-versions = ">=3.6.1"
+
 [[package]]
 name = "charset-normalizer"
 version = "2.1.1"
 description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6.0"
 
@@ -232,7 +298,7 @@ unicode_backport = ["unicodedata2"]
 name = "click"
 version = "8.0.4"
 description = "Composable command line interface toolkit"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -241,7 +307,7 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""}
 
 [[package]]
 name = "cloudpickle"
-version = "2.1.0"
+version = "2.2.0"
 description = "Extended pickling support for Python objects"
 category = "dev"
 optional = false
@@ -251,7 +317,7 @@ python-versions = ">=3.6"
 name = "colorama"
 version = "0.4.5"
 description = "Cross-platform colored terminal text."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
@@ -266,11 +332,29 @@ python-versions = "*"
 [package.extras]
 test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"]
 
+[[package]]
+name = "contourpy"
+version = "1.0.5"
+description = "Python library for calculating contours of 2D quadrilateral grids"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+numpy = ">=1.16"
+
+[package.extras]
+bokeh = ["bokeh", "selenium"]
+docs = ["docutils (<0.18)", "sphinx", "sphinx-rtd-theme"]
+test = ["Pillow", "flake8", "isort", "matplotlib", "pytest"]
+test-minimal = ["pytest"]
+test-no-codebase = ["Pillow", "matplotlib", "pytest"]
+
 [[package]]
 name = "cycler"
 version = "0.11.0"
 description = "Composable style cycles"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -315,6 +399,14 @@ category = "dev"
 optional = false
 python-versions = ">=3.5"
 
+[[package]]
+name = "defusedxml"
+version = "0.7.1"
+description = "XML bomb protection for Python stdlib modules"
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+
 [[package]]
 name = "dill"
 version = "0.3.5.1"
@@ -330,7 +422,7 @@ graph = ["objgraph (>=1.7.2)"]
 name = "distlib"
 version = "0.3.6"
 description = "Distribution utilities"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -358,11 +450,30 @@ category = "dev"
 optional = false
 python-versions = ">=3.6"
 
+[[package]]
+name = "executing"
+version = "1.0.0"
+description = "Get the currently executing AST node of a frame, and other information"
+category = "dev"
+optional = false
+python-versions = "*"
+
+[[package]]
+name = "fastjsonschema"
+version = "2.16.2"
+description = "Fastest Python implementation of JSON schema"
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.extras]
+devel = ["colorama", "json-spec", "jsonschema", "pylint", "pytest", "pytest-benchmark", "pytest-cache", "validictory"]
+
 [[package]]
 name = "filelock"
 version = "3.8.0"
 description = "A platform independent file lock."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -370,11 +481,24 @@ python-versions = ">=3.7"
 docs = ["furo (>=2022.6.21)", "sphinx (>=5.1.1)", "sphinx-autodoc-typehints (>=1.19.1)"]
 testing = ["covdefaults (>=2.2)", "coverage (>=6.4.2)", "pytest (>=7.1.2)", "pytest-cov (>=3)", "pytest-timeout (>=2.1)"]
 
+[[package]]
+name = "flake8"
+version = "4.0.1"
+description = "the modular source code checker: pep8 pyflakes and co"
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[package.dependencies]
+mccabe = ">=0.6.0,<0.7.0"
+pycodestyle = ">=2.8.0,<2.9.0"
+pyflakes = ">=2.4.0,<2.5.0"
+
 [[package]]
 name = "flatbuffers"
 version = "1.12"
 description = "The FlatBuffers serialization format for Python"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -391,9 +515,9 @@ six = ">=1.12,<2.0"
 
 [[package]]
 name = "fonttools"
-version = "4.37.1"
+version = "4.37.3"
 description = "Tools to manipulate font files"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -423,13 +547,13 @@ python-versions = ">=3.7"
 name = "frozenlist"
 version = "1.3.1"
 description = "A list-like structure which implements collections.abc.MutableSequence"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
 [[package]]
 name = "fsspec"
-version = "2022.7.1"
+version = "2022.8.2"
 description = "File-system specification"
 category = "dev"
 optional = false
@@ -449,7 +573,7 @@ github = ["requests"]
 gs = ["gcsfs"]
 gui = ["panel"]
 hdfs = ["pyarrow (>=1)"]
-http = ["aiohttp", "requests"]
+http = ["aiohttp (!=4.0.0a0,!=4.0.0a1)", "requests"]
 libarchive = ["libarchive-c"]
 oci = ["ocifs"]
 s3 = ["s3fs"]
@@ -462,7 +586,7 @@ tqdm = ["tqdm"]
 name = "future"
 version = "0.18.2"
 description = "Clean single-source support for Python 3 and 2"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 
@@ -470,7 +594,7 @@ python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 name = "gast"
 version = "0.4.0"
 description = "Python AST that abstracts the underlying Python version"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
@@ -478,7 +602,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 name = "gaussianprocessderivatives"
 version = "0.1.5"
 description = "Uses Gaussian processes to smooth data and estimate first- and second-order derivatives"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6.0,<3.11"
 
@@ -489,9 +613,9 @@ scipy = ">=1.7.3,<2.0.0"
 
 [[package]]
 name = "google-auth"
-version = "2.11.0"
+version = "2.11.1"
 description = "Google Authentication Library"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*"
 
@@ -511,7 +635,7 @@ reauth = ["pyu2f (>=0.1.5)"]
 name = "google-auth-oauthlib"
 version = "0.4.6"
 description = "Google Authentication Library"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -526,7 +650,7 @@ tool = ["click (>=6.0.0)"]
 name = "google-pasta"
 version = "0.2.0"
 description = "pasta is an AST-based Python refactoring library"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -537,7 +661,7 @@ six = "*"
 name = "grpcio"
 version = "1.43.0"
 description = "HTTP/2-based RPC framework"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -551,7 +675,7 @@ protobuf = ["grpcio-tools (>=1.43.0)"]
 name = "h5py"
 version = "2.10.0"
 description = "Read and write HDF5 files from Python"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -575,11 +699,22 @@ category = "dev"
 optional = false
 python-versions = ">=3.6"
 
+[[package]]
+name = "identify"
+version = "2.5.5"
+description = "File identification library for Python"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+license = ["ukkonen"]
+
 [[package]]
 name = "idna"
-version = "3.3"
+version = "3.4"
 description = "Internationalized Domain Names in Applications (IDNA)"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.5"
 
@@ -604,7 +739,7 @@ test-musl = ["networkx (>=2.5)", "pytest (>=7.0.1)"]
 name = "imageio"
 version = "2.8.0"
 description = "Library for reading and writing a wide range of image, video, scientific, and volumetric data formats."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.5"
 
@@ -627,11 +762,27 @@ category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
+[[package]]
+name = "importlib-metadata"
+version = "4.12.0"
+description = "Read metadata from Python packages"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+zipp = ">=0.5"
+
+[package.extras]
+docs = ["jaraco.packaging (>=9)", "rst.linker (>=1.9)", "sphinx"]
+perf = ["ipython"]
+testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)"]
+
 [[package]]
 name = "importlib-resources"
 version = "5.9.0"
 description = "Read resources from Python packages"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -652,7 +803,7 @@ python-versions = "*"
 
 [[package]]
 name = "ipykernel"
-version = "6.15.1"
+version = "6.15.3"
 description = "IPython Kernel for Jupyter"
 category = "dev"
 optional = false
@@ -676,11 +827,11 @@ test = ["flaky", "ipyparallel", "pre-commit", "pytest (>=6.0)", "pytest-cov", "p
 
 [[package]]
 name = "ipython"
-version = "7.34.0"
+version = "8.5.0"
 description = "IPython: Productive Interactive Computing"
 category = "dev"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 
 [package.dependencies]
 appnope = {version = "*", markers = "sys_platform == \"darwin\""}
@@ -691,13 +842,14 @@ jedi = ">=0.16"
 matplotlib-inline = "*"
 pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""}
 pickleshare = "*"
-prompt-toolkit = ">=2.0.0,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.1.0"
-pygments = "*"
-setuptools = ">=18.5"
-traitlets = ">=4.2"
+prompt-toolkit = ">3.0.1,<3.1.0"
+pygments = ">=2.4.0"
+stack-data = "*"
+traitlets = ">=5"
 
 [package.extras]
-all = ["Sphinx (>=1.3)", "ipykernel", "ipyparallel", "ipywidgets", "nbconvert", "nbformat", "nose (>=0.10.1)", "notebook", "numpy (>=1.17)", "pygments", "qtconsole", "requests", "testpath"]
+all = ["Sphinx (>=1.3)", "black", "curio", "ipykernel", "ipyparallel", "ipywidgets", "matplotlib (!=3.2.0)", "nbconvert", "nbformat", "notebook", "numpy (>=1.19)", "pandas", "pytest (<7.1)", "pytest-asyncio", "qtconsole", "testpath", "trio"]
+black = ["black"]
 doc = ["Sphinx (>=1.3)"]
 kernel = ["ipykernel"]
 nbconvert = ["nbconvert"]
@@ -705,16 +857,49 @@ nbformat = ["nbformat"]
 notebook = ["ipywidgets", "notebook"]
 parallel = ["ipyparallel"]
 qtconsole = ["qtconsole"]
-test = ["ipykernel", "nbformat", "nose (>=0.10.1)", "numpy (>=1.17)", "pygments", "requests", "testpath"]
+test = ["pytest (<7.1)", "pytest-asyncio", "testpath"]
+test_extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.19)", "pandas", "pytest (<7.1)", "pytest-asyncio", "testpath", "trio"]
 
 [[package]]
-name = "ipython-genutils"
+name = "ipython_genutils"
 version = "0.2.0"
 description = "Vestigial utilities from IPython"
 category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "ipywidgets"
+version = "8.0.2"
+description = "Jupyter interactive widgets"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+ipykernel = ">=4.5.1"
+ipython = ">=6.1.0"
+jupyterlab-widgets = ">=3.0,<4.0"
+traitlets = ">=4.3.1"
+widgetsnbextension = ">=4.0,<5.0"
+
+[package.extras]
+test = ["jsonschema", "pytest (>=3.6.0)", "pytest-cov", "pytz"]
+
+[[package]]
+name = "isort"
+version = "5.10.1"
+description = "A Python utility / library to sort Python imports."
+category = "dev"
+optional = false
+python-versions = ">=3.6.1,<4.0"
+
+[package.extras]
+colors = ["colorama (>=0.4.3,<0.5.0)"]
+pipfile_deprecated_finder = ["pipreqs", "requirementslib"]
+plugins = ["setuptools"]
+requirements_deprecated_finder = ["pip-api", "pipreqs"]
+
 [[package]]
 name = "jedi"
 version = "0.18.1"
@@ -731,7 +916,7 @@ qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
 testing = ["Django (<3.1)", "colorama", "docopt", "pytest (<7.0.0)"]
 
 [[package]]
-name = "jinja2"
+name = "Jinja2"
 version = "3.1.2"
 description = "A very fast and expressive template engine."
 category = "dev"
@@ -746,17 +931,17 @@ i18n = ["Babel (>=2.7)"]
 
 [[package]]
 name = "joblib"
-version = "1.1.0"
+version = "1.2.0"
 description = "Lightweight pipelining with Python functions"
-category = "dev"
+category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [[package]]
 name = "jsonschema"
-version = "4.14.0"
+version = "4.16.0"
 description = "An implementation of JSON Schema validation for Python"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -770,6 +955,22 @@ pyrsistent = ">=0.14.0,<0.17.0 || >0.17.0,<0.17.1 || >0.17.1,<0.17.2 || >0.17.2"
 format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
 format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
 
+[[package]]
+name = "jupyter"
+version = "1.0.0"
+description = "Jupyter metapackage. Install all the Jupyter components in one go."
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.dependencies]
+ipykernel = "*"
+ipywidgets = "*"
+jupyter-console = "*"
+nbconvert = "*"
+notebook = "*"
+qtconsole = "*"
+
 [[package]]
 name = "jupyter-client"
 version = "7.3.5"
@@ -791,6 +992,24 @@ traitlets = "*"
 doc = ["ipykernel", "myst-parser", "sphinx (>=1.3.6)", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
 test = ["codecov", "coverage", "ipykernel (>=6.5)", "ipython", "mypy", "pre-commit", "pytest", "pytest-asyncio (>=0.18)", "pytest-cov", "pytest-timeout"]
 
+[[package]]
+name = "jupyter-console"
+version = "6.4.4"
+description = "Jupyter terminal console"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+ipykernel = "*"
+ipython = "*"
+jupyter-client = ">=7.0.0"
+prompt-toolkit = ">=2.0.0,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.1.0"
+pygments = "*"
+
+[package.extras]
+test = ["pexpect"]
+
 [[package]]
 name = "jupyter-core"
 version = "4.11.1"
@@ -806,19 +1025,35 @@ traitlets = "*"
 [package.extras]
 test = ["ipykernel", "pre-commit", "pytest", "pytest-cov", "pytest-timeout"]
 
+[[package]]
+name = "jupyterlab-pygments"
+version = "0.2.2"
+description = "Pygments theme using JupyterLab CSS variables"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[[package]]
+name = "jupyterlab-widgets"
+version = "3.0.3"
+description = "Jupyter interactive widgets for JupyterLab"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
 [[package]]
 name = "keras"
 version = "2.9.0"
 description = "Deep learning for humans."
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
 [[package]]
-name = "keras-preprocessing"
+name = "Keras-Preprocessing"
 version = "1.1.2"
 description = "Easy data preprocessing and data augmentation for deep learning models"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -835,7 +1070,7 @@ tests = ["Pillow", "keras", "pandas", "pytest", "pytest-cov", "pytest-xdist", "t
 name = "keras-tuner"
 version = "1.0.1"
 description = "Hypertuner for Keras"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -857,7 +1092,7 @@ tests = ["flake8", "mock", "portpicker", "pytest", "pytest-cov", "pytest-xdist"]
 name = "kiwisolver"
 version = "1.4.4"
 description = "A fast implementation of the Cassowary constraint solver"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -876,7 +1111,7 @@ igraph = ">=0.9.0,<0.10"
 name = "libclang"
 version = "14.0.6"
 description = "Clang Python Bindings, mirrored from the official LLVM repo: https://github.com/llvm/llvm-project/tree/main/clang/bindings/python, to make the installation process easier."
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -888,6 +1123,20 @@ category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
+[[package]]
+name = "lxml"
+version = "4.9.1"
+description = "Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API."
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, != 3.4.*"
+
+[package.extras]
+cssselect = ["cssselect (>=0.7)"]
+html5 = ["html5lib"]
+htmlsoup = ["BeautifulSoup4"]
+source = ["Cython (>=0.29.7)"]
+
 [[package]]
 name = "magicgui"
 version = "0.5.1"
@@ -911,42 +1160,46 @@ testing = ["matplotlib", "numpy", "pandas", "pillow (>=4.0)", "pytest", "pytest-
 tqdm = ["tqdm (>=4.30.0)"]
 
 [[package]]
-name = "markdown"
-version = "3.3.5"
+name = "Markdown"
+version = "3.4.1"
 description = "Python implementation of Markdown."
-category = "dev"
+category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
+
+[package.dependencies]
+importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""}
 
 [package.extras]
 testing = ["coverage", "pyyaml"]
 
 [[package]]
-name = "markupsafe"
+name = "MarkupSafe"
 version = "2.1.1"
 description = "Safely add untrusted strings to HTML/XML markup."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
 [[package]]
 name = "matplotlib"
-version = "3.5.3"
+version = "3.6.0"
 description = "Python plotting package"
-category = "dev"
+category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 
 [package.dependencies]
+contourpy = ">=1.0.1"
 cycler = ">=0.10"
 fonttools = ">=4.22.0"
 kiwisolver = ">=1.0.1"
-numpy = ">=1.17"
+numpy = ">=1.19"
 packaging = ">=20.0"
 pillow = ">=6.2.0"
 pyparsing = ">=2.2.1"
 python-dateutil = ">=2.7"
-setuptools_scm = ">=4,<7"
+setuptools_scm = ">=7"
 
 [[package]]
 name = "matplotlib-inline"
@@ -959,6 +1212,22 @@ python-versions = ">=3.5"
 [package.dependencies]
 traitlets = "*"
 
+[[package]]
+name = "mccabe"
+version = "0.6.1"
+description = "McCabe checker, plugin for flake8"
+category = "dev"
+optional = false
+python-versions = "*"
+
+[[package]]
+name = "mistune"
+version = "2.0.4"
+description = "A sane Markdown parser with useful plugins and renderers"
+category = "dev"
+optional = false
+python-versions = "*"
+
 [[package]]
 name = "more-itertools"
 version = "8.14.0"
@@ -971,7 +1240,7 @@ python-versions = ">=3.5"
 name = "msgpack"
 version = "1.0.4"
 description = "MessagePack serializer"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -986,6 +1255,31 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*,
 [package.dependencies]
 dill = ">=0.3.5.1"
 
+[[package]]
+name = "mypy"
+version = "0.930"
+description = "Optional static typing for Python"
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[package.dependencies]
+mypy-extensions = ">=0.4.3"
+tomli = ">=1.1.0"
+typing-extensions = ">=3.10"
+
+[package.extras]
+dmypy = ["psutil (>=4.0)"]
+python2 = ["typed-ast (>=1.4.0,<2)"]
+
+[[package]]
+name = "mypy-extensions"
+version = "0.4.3"
+description = "Experimental type system extensions for programs checked with the mypy typechecker."
+category = "dev"
+optional = false
+python-versions = "*"
+
 [[package]]
 name = "napari"
 version = "0.4.16"
@@ -1093,6 +1387,77 @@ vispy = ">=0.6.4"
 [package.extras]
 testing = ["napari (>=0.4)", "pyqt5", "pytest", "pytest-cov"]
 
+[[package]]
+name = "nbclient"
+version = "0.6.8"
+description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor."
+category = "dev"
+optional = false
+python-versions = ">=3.7.0"
+
+[package.dependencies]
+jupyter-client = ">=6.1.5"
+nbformat = ">=5.0"
+nest-asyncio = "*"
+traitlets = ">=5.2.2"
+
+[package.extras]
+sphinx = ["Sphinx (>=1.7)", "autodoc-traits", "mock", "moto", "myst-parser", "sphinx-book-theme"]
+test = ["black", "check-manifest", "flake8", "ipykernel", "ipython", "ipywidgets", "mypy", "nbconvert", "pip (>=18.1)", "pre-commit", "pytest (>=4.1)", "pytest-asyncio", "pytest-cov (>=2.6.1)", "setuptools (>=60.0)", "testpath", "twine (>=1.11.0)", "xmltodict"]
+
+[[package]]
+name = "nbconvert"
+version = "7.0.0"
+description = "Converting Jupyter Notebooks"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+beautifulsoup4 = "*"
+bleach = "*"
+defusedxml = "*"
+importlib-metadata = {version = ">=3.6", markers = "python_version < \"3.10\""}
+jinja2 = ">=3.0"
+jupyter-core = ">=4.7"
+jupyterlab-pygments = "*"
+lxml = "*"
+markupsafe = ">=2.0"
+mistune = ">=2.0.3,<3"
+nbclient = ">=0.5.0"
+nbformat = ">=5.1"
+packaging = "*"
+pandocfilters = ">=1.4.1"
+pygments = ">=2.4.1"
+tinycss2 = "*"
+traitlets = ">=5.0"
+
+[package.extras]
+all = ["ipykernel", "ipython", "ipywidgets (>=7)", "nbsphinx (>=0.2.12)", "pre-commit", "pyppeteer (>=1,<1.1)", "pyqtwebengine (>=5.15)", "pytest", "pytest-cov", "pytest-dependency", "sphinx (==5.0.2)", "sphinx-rtd-theme", "tornado (>=6.1)"]
+docs = ["ipython", "nbsphinx (>=0.2.12)", "sphinx (==5.0.2)", "sphinx-rtd-theme"]
+qtpdf = ["pyqtwebengine (>=5.15)"]
+qtpng = ["pyqtwebengine (>=5.15)"]
+serve = ["tornado (>=6.1)"]
+test = ["ipykernel", "ipywidgets (>=7)", "pre-commit", "pyppeteer (>=1,<1.1)", "pytest", "pytest-cov", "pytest-dependency"]
+webpdf = ["pyppeteer (>=1,<1.1)"]
+
+[[package]]
+name = "nbformat"
+version = "5.6.0"
+description = "The Jupyter Notebook format"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+fastjsonschema = "*"
+jsonschema = ">=2.6"
+jupyter-core = "*"
+traitlets = ">=5.1"
+
+[package.extras]
+test = ["check-manifest", "pep440", "pre-commit", "pytest", "testpath"]
+
 [[package]]
 name = "nest-asyncio"
 version = "1.5.5"
@@ -1103,18 +1468,59 @@ python-versions = ">=3.5"
 
 [[package]]
 name = "networkx"
-version = "2.6.3"
+version = "2.8.6"
 description = "Python package for creating and manipulating graphs and networks"
+category = "main"
+optional = false
+python-versions = ">=3.8"
+
+[package.extras]
+default = ["matplotlib (>=3.4)", "numpy (>=1.19)", "pandas (>=1.3)", "scipy (>=1.8)"]
+developer = ["mypy (>=0.961)", "pre-commit (>=2.20)"]
+doc = ["nb2plots (>=0.6)", "numpydoc (>=1.4)", "pillow (>=9.1)", "pydata-sphinx-theme (>=0.9)", "sphinx (>=5)", "sphinx-gallery (>=0.10)", "texext (>=0.6.6)"]
+extra = ["lxml (>=4.6)", "pydot (>=1.4.2)", "pygraphviz (>=1.9)", "sympy (>=1.10)"]
+test = ["codecov (>=2.1)", "pytest (>=7.1)", "pytest-cov (>=3.0)"]
+
+[[package]]
+name = "nodeenv"
+version = "1.7.0"
+description = "Node.js virtual environment builder"
+category = "dev"
+optional = false
+python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*"
+
+[package.dependencies]
+setuptools = "*"
+
+[[package]]
+name = "notebook"
+version = "6.4.12"
+description = "A web-based notebook environment for interactive computing"
 category = "dev"
 optional = false
 python-versions = ">=3.7"
 
+[package.dependencies]
+argon2-cffi = "*"
+ipykernel = "*"
+ipython-genutils = "*"
+jinja2 = "*"
+jupyter-client = ">=5.3.4"
+jupyter-core = ">=4.6.1"
+nbconvert = ">=5"
+nbformat = "*"
+nest-asyncio = ">=1.5"
+prometheus-client = "*"
+pyzmq = ">=17"
+Send2Trash = ">=1.8.0"
+terminado = ">=0.8.3"
+tornado = ">=6.1"
+traitlets = ">=4.2.1"
+
 [package.extras]
-default = ["matplotlib (>=3.3)", "numpy (>=1.19)", "pandas (>=1.1)", "scipy (>=1.5,!=1.6.1)"]
-developer = ["black (==21.5b1)", "pre-commit (>=2.12)"]
-doc = ["nb2plots (>=0.6)", "numpydoc (>=1.1)", "pillow (>=8.2)", "pydata-sphinx-theme (>=0.6,<1.0)", "sphinx (>=4.0,<5.0)", "sphinx-gallery (>=0.9,<1.0)", "texext (>=0.6.6)"]
-extra = ["lxml (>=4.5)", "pydot (>=1.4.1)", "pygraphviz (>=1.7)"]
-test = ["codecov (>=2.1)", "pytest (>=6.2)", "pytest-cov (>=2.12)"]
+docs = ["myst-parser", "nbsphinx", "sphinx", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
+json-logging = ["json-logging"]
+test = ["coverage", "nbval", "pytest", "pytest-cov", "requests", "requests-unixsocket", "selenium", "testpath"]
 
 [[package]]
 name = "npe2"
@@ -1165,9 +1571,9 @@ testing = ["matplotlib", "pytest", "pytest-cov"]
 
 [[package]]
 name = "oauthlib"
-version = "3.2.0"
+version = "3.2.1"
 description = "A generic, spec-compliant, thorough implementation of the OAuth request-signing logic"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -1178,7 +1584,7 @@ signedtoken = ["cryptography (>=3.0.0)", "pyjwt (>=2.0.0,<3)"]
 
 [[package]]
 name = "omero-py"
-version = "5.11.2"
+version = "5.12.0"
 description = "Python bindings to the OMERO.blitz server"
 category = "dev"
 optional = false
@@ -1198,7 +1604,7 @@ zeroc-ice = ">=3.6.4,<3.7"
 name = "opencv-python"
 version = "4.1.2.30"
 description = "Wrapper package for OpenCV python bindings."
-category = "main"
+category = "dev"
 optional = false
 python-versions = "*"
 
@@ -1209,7 +1615,7 @@ numpy = ">=1.11.1"
 name = "opt-einsum"
 version = "3.3.0"
 description = "Optimizing numpys einsum function"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.5"
 
@@ -1237,7 +1643,7 @@ tqdm = ">=4.45.0"
 name = "packaging"
 version = "21.3"
 description = "Core utilities for Python packages"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -1260,6 +1666,14 @@ pytz = ">=2017.3"
 [package.extras]
 test = ["hypothesis (>=3.58)", "pytest (>=6.0)", "pytest-xdist"]
 
+[[package]]
+name = "pandocfilters"
+version = "1.5.0"
+description = "Utilities for writing pandoc filters in python"
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+
 [[package]]
 name = "parso"
 version = "0.8.3"
@@ -1301,6 +1715,14 @@ multiprocess = ">=0.70.13"
 pox = ">=0.3.1"
 ppft = ">=1.7.6.5"
 
+[[package]]
+name = "pathspec"
+version = "0.10.1"
+description = "Utility library for gitignore style pattern matching of file paths."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
 [[package]]
 name = "pep517"
 version = "0.13.0"
@@ -1332,10 +1754,10 @@ optional = false
 python-versions = "*"
 
 [[package]]
-name = "pillow"
+name = "Pillow"
 version = "9.2.0"
 description = "Python Imaging Library (Fork)"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -1357,10 +1779,10 @@ test = ["pytest", "pytest-cov", "pytest-mpl", "pytest-subtests"]
 uncertainties = ["uncertainties (>=3.1.6)"]
 
 [[package]]
-name = "pkgutil-resolve-name"
+name = "pkgutil_resolve_name"
 version = "1.3.10"
 description = "Resolve a name to an object."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -1368,7 +1790,7 @@ python-versions = ">=3.6"
 name = "platformdirs"
 version = "2.5.2"
 description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -1410,9 +1832,36 @@ six = ">=1.7.3"
 [package.extras]
 dill = ["dill (>=0.3.5)"]
 
+[[package]]
+name = "pre-commit"
+version = "2.20.0"
+description = "A framework for managing and maintaining multi-language pre-commit hooks."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+cfgv = ">=2.0.0"
+identify = ">=1.0.0"
+nodeenv = ">=0.11.1"
+pyyaml = ">=5.1"
+toml = "*"
+virtualenv = ">=20.0.8"
+
+[[package]]
+name = "prometheus-client"
+version = "0.14.1"
+description = "Python client for the Prometheus monitoring system."
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[package.extras]
+twisted = ["twisted"]
+
 [[package]]
 name = "prompt-toolkit"
-version = "3.0.30"
+version = "3.0.31"
 description = "Library for building powerful interactive command lines in Python"
 category = "dev"
 optional = false
@@ -1425,13 +1874,13 @@ wcwidth = "*"
 name = "protobuf"
 version = "3.20.1"
 description = "Protocol Buffers"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
 [[package]]
 name = "psutil"
-version = "5.9.1"
+version = "5.9.2"
 description = "Cross-platform lib for process and system monitoring in Python."
 category = "dev"
 optional = false
@@ -1468,6 +1917,17 @@ category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "pure-eval"
+version = "0.2.2"
+description = "Safely evaluate AST nodes without side effects"
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.extras]
+tests = ["pytest"]
+
 [[package]]
 name = "py"
 version = "1.11.0"
@@ -1491,7 +1951,7 @@ numpy = ">=1.13.0"
 name = "pyasn1"
 version = "0.4.8"
 description = "ASN.1 types and codecs"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -1499,7 +1959,7 @@ python-versions = "*"
 name = "pyasn1-modules"
 version = "0.2.8"
 description = "A collection of ASN.1-based protocols modules."
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -1514,6 +1974,14 @@ category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "pycodestyle"
+version = "2.8.0"
+description = "Python style guide checker"
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+
 [[package]]
 name = "pycparser"
 version = "2.21"
@@ -1538,7 +2006,15 @@ dotenv = ["python-dotenv (>=0.10.4)"]
 email = ["email-validator (>=1.0.3)"]
 
 [[package]]
-name = "pygments"
+name = "pyflakes"
+version = "2.4.0"
+description = "passive checker of Python programs"
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+
+[[package]]
+name = "Pygments"
 version = "2.13.0"
 description = "Pygments is a syntax highlighting package written in Python."
 category = "dev"
@@ -1560,18 +2036,33 @@ python-versions = "*"
 name = "pyparsing"
 version = "3.0.9"
 description = "pyparsing module - Classes and methods to define and execute parsing grammars"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6.8"
 
 [package.extras]
 diagrams = ["jinja2", "railroad-diagrams"]
 
+[[package]]
+name = "pyright"
+version = "1.1.272"
+description = "Command line wrapper for pyright"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+nodeenv = ">=1.6.0"
+
+[package.extras]
+all = ["twine (>=3.4.1)"]
+dev = ["twine (>=3.4.1)"]
+
 [[package]]
 name = "pyrsistent"
 version = "0.18.1"
 description = "Persistent/Functional/Immutable data structures"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -1624,12 +2115,12 @@ optional = false
 python-versions = "*"
 
 [[package]]
-name = "pywavelets"
-version = "1.3.0"
+name = "PyWavelets"
+version = "1.4.1"
 description = "PyWavelets, wavelet transform module"
-category = "dev"
+category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 
 [package.dependencies]
 numpy = ">=1.17.3"
@@ -1643,7 +2134,15 @@ optional = false
 python-versions = "*"
 
 [[package]]
-name = "pyyaml"
+name = "pywinpty"
+version = "2.0.8"
+description = "Pseudo terminal support for Windows from Python."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[[package]]
+name = "PyYAML"
 version = "6.0"
 description = "YAML parser and emitter for Python"
 category = "main"
@@ -1652,7 +2151,7 @@ python-versions = ">=3.6"
 
 [[package]]
 name = "pyzmq"
-version = "23.2.1"
+version = "24.0.1"
 description = "Python bindings for 0MQ"
 category = "dev"
 optional = false
@@ -1685,7 +2184,7 @@ doc = ["Sphinx (>=1.3)"]
 test = ["flaky", "pytest", "pytest-qt"]
 
 [[package]]
-name = "qtpy"
+name = "QtPy"
 version = "2.2.0"
 description = "Provides an abstraction layer on top of the various Qt bindings (PyQt5/6 and PySide2/6)."
 category = "dev"
@@ -1702,7 +2201,7 @@ test = ["pytest (>=6,!=7.0.0,!=7.0.1)", "pytest-cov (>=3.0.0)", "pytest-qt"]
 name = "ray"
 version = "1.13.0"
 description = "Ray provides a simple, universal API for building distributed applications."
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -1742,7 +2241,7 @@ tune = ["pandas", "requests", "tabulate", "tensorboardX (>=1.9)"]
 name = "requests"
 version = "2.28.1"
 description = "Python HTTP for Humans."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7, <4"
 
@@ -1760,7 +2259,7 @@ use_chardet_on_py3 = ["chardet (>=3.0.2,<6)"]
 name = "requests-oauthlib"
 version = "1.3.1"
 description = "OAuthlib authentication support for Requests."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
@@ -1802,7 +2301,7 @@ jupyter = ["ipywidgets (>=7.5.1,<8.0.0)"]
 name = "rsa"
 version = "4.9"
 description = "Pure-Python RSA implementation"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6,<4"
 
@@ -1813,7 +2312,7 @@ pyasn1 = ">=0.1.3"
 name = "scikit-image"
 version = "0.19.3"
 description = "Image processing in Python"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -1835,34 +2334,34 @@ test = ["asv", "codecov", "flake8", "matplotlib (>=3.0.3)", "pooch (>=1.3.0)", "
 
 [[package]]
 name = "scikit-learn"
-version = "1.0.2"
+version = "1.1.2"
 description = "A set of python modules for machine learning and data mining"
-category = "dev"
+category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 
 [package.dependencies]
-joblib = ">=0.11"
-numpy = ">=1.14.6"
-scipy = ">=1.1.0"
+joblib = ">=1.0.0"
+numpy = ">=1.17.3"
+scipy = ">=1.3.2"
 threadpoolctl = ">=2.0.0"
 
 [package.extras]
-benchmark = ["matplotlib (>=2.2.3)", "memory-profiler (>=0.57.0)", "pandas (>=0.25.0)"]
-docs = ["Pillow (>=7.1.2)", "matplotlib (>=2.2.3)", "memory-profiler (>=0.57.0)", "numpydoc (>=1.0.0)", "pandas (>=0.25.0)", "scikit-image (>=0.14.5)", "seaborn (>=0.9.0)", "sphinx (>=4.0.1)", "sphinx-gallery (>=0.7.0)", "sphinx-prompt (>=1.3.0)", "sphinxext-opengraph (>=0.4.2)"]
-examples = ["matplotlib (>=2.2.3)", "pandas (>=0.25.0)", "scikit-image (>=0.14.5)", "seaborn (>=0.9.0)"]
-tests = ["black (>=21.6b0)", "flake8 (>=3.8.2)", "matplotlib (>=2.2.3)", "mypy (>=0.770)", "pandas (>=0.25.0)", "pyamg (>=4.0.0)", "pytest (>=5.0.1)", "pytest-cov (>=2.9.0)", "scikit-image (>=0.14.5)"]
+benchmark = ["matplotlib (>=3.1.2)", "memory-profiler (>=0.57.0)", "pandas (>=1.0.5)"]
+docs = ["Pillow (>=7.1.2)", "matplotlib (>=3.1.2)", "memory-profiler (>=0.57.0)", "numpydoc (>=1.2.0)", "pandas (>=1.0.5)", "scikit-image (>=0.16.2)", "seaborn (>=0.9.0)", "sphinx (>=4.0.1)", "sphinx-gallery (>=0.7.0)", "sphinx-prompt (>=1.3.0)", "sphinxext-opengraph (>=0.4.2)"]
+examples = ["matplotlib (>=3.1.2)", "pandas (>=1.0.5)", "scikit-image (>=0.16.2)", "seaborn (>=0.9.0)"]
+tests = ["black (>=22.3.0)", "flake8 (>=3.8.2)", "matplotlib (>=3.1.2)", "mypy (>=0.961)", "numpydoc (>=1.2.0)", "pandas (>=1.0.5)", "pyamg (>=4.0.0)", "pytest (>=5.0.1)", "pytest-cov (>=2.9.0)", "scikit-image (>=0.16.2)"]
 
 [[package]]
 name = "scipy"
-version = "1.7.3"
+version = "1.9.1"
 description = "SciPy: Scientific Library for Python"
 category = "main"
 optional = false
-python-versions = ">=3.7,<3.11"
+python-versions = ">=3.8,<3.12"
 
 [package.dependencies]
-numpy = ">=1.16.5,<1.23.0"
+numpy = ">=1.18.5,<1.25.0"
 
 [[package]]
 name = "seaborn"
@@ -1878,11 +2377,24 @@ numpy = ">=1.15"
 pandas = ">=0.23"
 scipy = ">=1.0"
 
+[[package]]
+name = "Send2Trash"
+version = "1.8.0"
+description = "Send file to trash natively under Mac OS X, Windows and Linux."
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.extras]
+nativelib = ["pyobjc-framework-Cocoa", "pywin32"]
+objc = ["pyobjc-framework-Cocoa"]
+win32 = ["pywin32"]
+
 [[package]]
 name = "setuptools"
 version = "65.3.0"
 description = "Easily download, build, install, upgrade, and uninstall Python packages"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -1893,16 +2405,17 @@ testing-integration = ["build[virtualenv]", "filelock (>=3.4.0)", "jaraco.envs (
 
 [[package]]
 name = "setuptools-scm"
-version = "6.4.2"
+version = "7.0.5"
 description = "the blessed package to manage your versions by scm tags"
-category = "dev"
+category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.dependencies]
 packaging = ">=20.0"
 setuptools = "*"
 tomli = ">=1.0.0"
+typing-extensions = "*"
 
 [package.extras]
 test = ["pytest (>=6.2)", "virtualenv (>20)"]
@@ -1925,8 +2438,16 @@ optional = false
 python-versions = "*"
 
 [[package]]
-name = "sphinx"
-version = "4.3.2"
+name = "soupsieve"
+version = "2.3.2.post1"
+description = "A modern CSS selector implementation for Beautiful Soup."
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[[package]]
+name = "Sphinx"
+version = "4.5.0"
 description = "Python documentation generator"
 category = "dev"
 optional = false
@@ -1938,11 +2459,11 @@ babel = ">=1.3"
 colorama = {version = ">=0.3.5", markers = "sys_platform == \"win32\""}
 docutils = ">=0.14,<0.18"
 imagesize = "*"
+importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""}
 Jinja2 = ">=2.3"
 packaging = "*"
 Pygments = ">=2.0"
 requests = ">=2.5.0"
-setuptools = "*"
 snowballstemmer = ">=1.1"
 sphinxcontrib-applehelp = "*"
 sphinxcontrib-devhelp = "*"
@@ -1953,7 +2474,7 @@ sphinxcontrib-serializinghtml = ">=1.1.5"
 
 [package.extras]
 docs = ["sphinxcontrib-websupport"]
-lint = ["docutils-stubs", "flake8 (>=3.5.0)", "isort", "mypy (>=0.920)", "types-pkg-resources", "types-requests", "types-typed-ast"]
+lint = ["docutils-stubs", "flake8 (>=3.5.0)", "isort", "mypy (>=0.931)", "types-requests", "types-typed-ast"]
 test = ["cython", "html5lib", "pytest", "pytest-cov", "typed-ast"]
 
 [[package]]
@@ -2027,6 +2548,22 @@ python-versions = ">=3.5"
 lint = ["docutils-stubs", "flake8", "mypy"]
 test = ["pytest"]
 
+[[package]]
+name = "stack-data"
+version = "0.5.0"
+description = "Extract data from python stack frames and tracebacks for informative displays"
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.dependencies]
+asttokens = "*"
+executing = "*"
+pure-eval = "*"
+
+[package.extras]
+tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
+
 [[package]]
 name = "superqt"
 version = "0.3.5"
@@ -2055,7 +2592,7 @@ testing = ["pytest", "pytest-cov", "pytest-qt", "tox", "tox-conda"]
 name = "tabulate"
 version = "0.8.10"
 description = "Pretty-print tabular data"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
@@ -2066,7 +2603,7 @@ widechars = ["wcwidth"]
 name = "tensorboard"
 version = "2.9.0"
 description = "TensorBoard lets you watch Tensors Flow"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -2089,7 +2626,7 @@ wheel = ">=0.26"
 name = "tensorboard-data-server"
 version = "0.6.1"
 description = "Fast data loading for TensorBoard"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -2097,15 +2634,15 @@ python-versions = ">=3.6"
 name = "tensorboard-plugin-wit"
 version = "1.8.1"
 description = "What-If Tool TensorBoard plugin."
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
 [[package]]
-name = "tensorboardx"
+name = "tensorboardX"
 version = "2.5.1"
 description = "TensorBoardX lets you watch Tensors Flow without Tensorflow"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -2117,7 +2654,7 @@ protobuf = ">=3.8.0,<=3.20.1"
 name = "tensorflow"
 version = "2.9.0"
 description = "TensorFlow is an open source machine learning framework for everyone."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -2149,38 +2686,57 @@ wrapt = ">=1.11.0"
 name = "tensorflow-estimator"
 version = "2.9.0"
 description = "TensorFlow Estimator."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
 [[package]]
 name = "tensorflow-io-gcs-filesystem"
-version = "0.26.0"
+version = "0.27.0"
 description = "TensorFlow IO"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7, <3.11"
 
 [package.extras]
-tensorflow = ["tensorflow (>=2.9.0,<2.10.0)"]
-tensorflow-aarch64 = ["tensorflow-aarch64 (>=2.9.0,<2.10.0)"]
-tensorflow-cpu = ["tensorflow-cpu (>=2.9.0,<2.10.0)"]
-tensorflow-gpu = ["tensorflow-gpu (>=2.9.0,<2.10.0)"]
-tensorflow-rocm = ["tensorflow-rocm (>=2.9.0,<2.10.0)"]
+tensorflow = ["tensorflow (>=2.10.0,<2.11.0)"]
+tensorflow-aarch64 = ["tensorflow-aarch64 (>=2.10.0,<2.11.0)"]
+tensorflow-cpu = ["tensorflow-cpu (>=2.10.0,<2.11.0)"]
+tensorflow-gpu = ["tensorflow-gpu (>=2.10.0,<2.11.0)"]
+tensorflow-rocm = ["tensorflow-rocm (>=2.10.0,<2.11.0)"]
 
 [[package]]
 name = "termcolor"
-version = "1.1.0"
-description = "ANSII Color formatting for output in terminal."
+version = "2.0.1"
+description = "ANSI color formatting for output in terminal"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+tests = ["pytest", "pytest-cov"]
+
+[[package]]
+name = "terminado"
+version = "0.15.0"
+description = "Tornado websocket backend for the Xterm.js Javascript terminal emulator library."
 category = "dev"
 optional = false
-python-versions = "*"
+python-versions = ">=3.7"
+
+[package.dependencies]
+ptyprocess = {version = "*", markers = "os_name != \"nt\""}
+pywinpty = {version = ">=1.1.0", markers = "os_name == \"nt\""}
+tornado = ">=6.1.0"
+
+[package.extras]
+test = ["pre-commit", "pytest (>=6.0)", "pytest-timeout"]
 
 [[package]]
 name = "terminaltables"
 version = "3.1.10"
 description = "Generate simple tables in terminals from a nested list of strings."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.6"
 
@@ -2196,23 +2752,38 @@ python-versions = "*"
 name = "threadpoolctl"
 version = "3.1.0"
 description = "threadpoolctl"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
 [[package]]
 name = "tifffile"
-version = "2021.11.2"
+version = "2022.8.12"
 description = "Read and write TIFF files"
+category = "main"
+optional = false
+python-versions = ">=3.8"
+
+[package.dependencies]
+numpy = ">=1.19.2"
+
+[package.extras]
+all = ["imagecodecs (>=2022.2.22)", "lxml", "matplotlib (>=3.3)"]
+
+[[package]]
+name = "tinycss2"
+version = "1.1.1"
+description = "A tiny CSS parser"
 category = "dev"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.6"
 
 [package.dependencies]
-numpy = ">=1.15.1"
+webencodings = ">=0.4"
 
 [package.extras]
-all = ["imagecodecs (>=2021.7.30)", "lxml", "matplotlib (>=3.2)"]
+doc = ["sphinx", "sphinx_rtd_theme"]
+test = ["coverage[toml]", "pytest", "pytest-cov", "pytest-flake8", "pytest-isort"]
 
 [[package]]
 name = "toml"
@@ -2226,7 +2797,7 @@ python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 name = "tomli"
 version = "2.0.1"
 description = "A lil' TOML parser"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -2248,9 +2819,9 @@ python-versions = ">= 3.7"
 
 [[package]]
 name = "tqdm"
-version = "4.64.0"
+version = "4.64.1"
 description = "Fast, Extensible Progress Meter"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7"
 
@@ -2265,7 +2836,7 @@ telegram = ["requests"]
 
 [[package]]
 name = "traitlets"
-version = "5.3.0"
+version = "5.4.0"
 description = ""
 category = "dev"
 optional = false
@@ -2278,7 +2849,7 @@ test = ["pre-commit", "pytest"]
 name = "tune-sklearn"
 version = "0.4.3"
 description = "A drop-in replacement for Scikit-Learn's GridSearchCV / RandomizedSearchCV with cutting edge hyperparameter tuning techniques."
-category = "dev"
+category = "main"
 optional = false
 python-versions = "*"
 
@@ -2309,7 +2880,7 @@ test = ["black (>=22.3.0,<23.0.0)", "coverage (>=5.2,<6.0)", "isort (>=5.0.6,<6.
 name = "typing-extensions"
 version = "4.3.0"
 description = "Backported and Experimental Type Hints for Python 3.7+"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -2317,7 +2888,7 @@ python-versions = ">=3.7"
 name = "urllib3"
 version = "1.26.12"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, <4"
 
@@ -2328,20 +2899,20 @@ socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 
 [[package]]
 name = "virtualenv"
-version = "20.16.2"
+version = "20.16.5"
 description = "Virtual Python Environment builder"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
 [package.dependencies]
-distlib = ">=0.3.1,<1"
-filelock = ">=3.2,<4"
-platformdirs = ">=2,<3"
+distlib = ">=0.3.5,<1"
+filelock = ">=3.4.1,<4"
+platformdirs = ">=2.4,<3"
 
 [package.extras]
-docs = ["proselint (>=0.10.2)", "sphinx (>=3)", "sphinx-argparse (>=0.2.5)", "sphinx-rtd-theme (>=0.4.3)", "towncrier (>=21.3)"]
-testing = ["coverage (>=4)", "coverage-enable-subprocess (>=1)", "flaky (>=3)", "packaging (>=20.0)", "pytest (>=4)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.1)", "pytest-mock (>=2)", "pytest-randomly (>=1)", "pytest-timeout (>=1)"]
+docs = ["proselint (>=0.13)", "sphinx (>=5.1.1)", "sphinx-argparse (>=0.3.1)", "sphinx-rtd-theme (>=1)", "towncrier (>=21.9)"]
+testing = ["coverage (>=6.2)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=21.3)", "pytest (>=7.0.1)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.2)", "pytest-mock (>=3.6.1)", "pytest-randomly (>=3.10.3)", "pytest-timeout (>=2.1)"]
 
 [[package]]
 name = "vispy"
@@ -2380,10 +2951,18 @@ optional = false
 python-versions = "*"
 
 [[package]]
-name = "werkzeug"
+name = "webencodings"
+version = "0.5.1"
+description = "Character encoding aliases for legacy web content"
+category = "dev"
+optional = false
+python-versions = "*"
+
+[[package]]
+name = "Werkzeug"
 version = "2.2.2"
 description = "The comprehensive WSGI web application library."
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -2397,18 +2976,26 @@ watchdog = ["watchdog"]
 name = "wheel"
 version = "0.37.1"
 description = "A built-package format for Python"
-category = "dev"
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
 
 [package.extras]
 test = ["pytest (>=3.0.0)", "pytest-cov"]
 
+[[package]]
+name = "widgetsnbextension"
+version = "4.0.3"
+description = "Jupyter interactive widgets for Jupyter Notebook"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
 [[package]]
 name = "wrapt"
 version = "1.14.1"
 description = "Module for decorators, wrappers and monkey patching."
-category = "dev"
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
 
@@ -2416,7 +3003,7 @@ python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
 name = "xgboost"
 version = "1.4.2"
 description = "XGBoost Python Package"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 
@@ -2451,7 +3038,7 @@ python-versions = "*"
 name = "zipp"
 version = "3.8.1"
 description = "Backport of pathlib-compatible object wrapper for zip files"
-category = "dev"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 
@@ -2461,8 +3048,8 @@ testing = ["func-timeout", "jaraco.itertools", "pytest (>=6)", "pytest-black (>=
 
 [metadata]
 lock-version = "1.1"
-python-versions = ">=3.8,<3.11"
-content-hash = "b537be9803fe96fcb4f8447618b15e57730f0deedad7c7b046c9753f20dec00b"
+python-versions = ">=3.8, <3.11"
+content-hash = "8d0cf053b6f4f7383916473308283ca729e43d21fea67a58129d23bf83110fb0"
 
 [metadata.files]
 absl-py = [
@@ -2477,18 +3064,10 @@ alabaster = [
     {file = "alabaster-0.7.12-py2.py3-none-any.whl", hash = "sha256:446438bdcca0e05bd45ea2de1668c1d9b032e1a9154c2c259092d77031ddd359"},
     {file = "alabaster-0.7.12.tar.gz", hash = "sha256:a661d72d58e6ea8a57f7a86e37d86716863ee5e92788398526d58b26a4e4dc02"},
 ]
-aliby-agora = [
-    {file = "aliby-agora-0.2.33.tar.gz", hash = "sha256:53653c8cf36c6dd82778381658da6ab86a3934d8f93e67db104197ca32ff5bb4"},
-    {file = "aliby_agora-0.2.33-py3-none-any.whl", hash = "sha256:e7e137c76f0cb92618b13c3a24fff6fce8a7e1bdee3416c045a3f084c21e790f"},
-]
 aliby-baby = [
     {file = "aliby-baby-0.1.14.tar.gz", hash = "sha256:836bd9af27d5d750f440238e17b157a2b0d4586387864bece925d391320005e8"},
     {file = "aliby_baby-0.1.14-py3-none-any.whl", hash = "sha256:79e838e80c429af1cb9577df18ece8145500a07e2416bb3bbe7afd11dd7bc0b1"},
 ]
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     {file = "superqt-0.3.5.tar.gz", hash = "sha256:10b0ab5ce1c4f35e51d8b6598eac41a69ae449dd2c57122426cfc565e262df5e"},
@@ -4162,7 +5087,7 @@ tensorboard-data-server = [
 tensorboard-plugin-wit = [
     {file = "tensorboard_plugin_wit-1.8.1-py3-none-any.whl", hash = "sha256:ff26bdd583d155aa951ee3b152b3d0cffae8005dc697f72b44a8e8c2a77a8cbe"},
 ]
-tensorboardx = [
+tensorboardX = [
     {file = "tensorboardX-2.5.1-py2.py3-none-any.whl", hash = "sha256:8808133ccca673cd04076f6f2a85cf2d39bb2d0393a0f20d0f9cbb06d472b57e"},
     {file = "tensorboardX-2.5.1.tar.gz", hash = "sha256:ea85a3446f22ce8a917fe4fa4d8a7a96222ef84ac835267d038c34bb99f6d61b"},
 ]
@@ -4184,25 +5109,26 @@ tensorflow-estimator = [
     {file = "tensorflow_estimator-2.9.0-py2.py3-none-any.whl", hash = "sha256:e9762bb302f51bc1eb2f35d19f0190a6a2d809d754d5def788c4328fe3746744"},
 ]
 tensorflow-io-gcs-filesystem = [
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp310-cp310-macosx_10_14_x86_64.whl", hash = "sha256:4222a9d0c0ddeca2fd2bfd70f5ed149346f5ba12ffe65d817d8e18393341d8e2"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:5457eeef1f0f5f294225808b2290a251a2e4639ec66db9d32aa4ae62e807d7e8"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:4c71cebb26ce10e6e48dc46e6fc0acef5329b01f75a5e76c7defb77175bf97f7"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp310-cp310-win_amd64.whl", hash = "sha256:1c165595c7a67668b44c7ffb9746ffb351c630940d9cca7f2b31f8adf7a36b94"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp37-cp37m-macosx_10_14_x86_64.whl", hash = "sha256:c20e1f95b904f43ac86fdb251f222be2c3e7026e9ddbde2a3b6a456f26a83944"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:1cccdc12ec304a7ab3e6f85919ba5a77c2bf751b3d0f9e62196ee7df11a8136a"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:94645cac4449dd2ccc40327c23d0256cf4e96597e5a55116a91076e9dc96023e"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp37-cp37m-win_amd64.whl", hash = "sha256:ce0d7eaaebfcb5fdcff161af0e8a4b94d5dc346299111c08373d66058011a16d"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp38-cp38-macosx_10_14_x86_64.whl", hash = "sha256:e9569dadd79b2d4b28dbe5be47c378a884414a85c89eaeae6115bcba4f3cbb96"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:84a463e228cde296fc63672902a2eceac9fec5f8ae7605e9f18824db591e7f5c"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:531214e48ef64a96f565550b283e75cf0119abff14048a11a25453b47ec5b61c"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp38-cp38-win_amd64.whl", hash = "sha256:44b28c9c6a9e25774a53ec2e85ed4d0b5c4db3a7d3a4011ade94fa9ee636393c"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp39-cp39-macosx_10_14_x86_64.whl", hash = "sha256:09f9df13737e2b4d92b73653509281d77732ef9a90a1ebef824511ce5431eb0a"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:c71438e6459f52462b95f98ab17b20cd1a269a1efe837e4df426a0b79359f3b7"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:bd285595afe03740553710ccdbd1397d69a8e48d758c731c0de1f1c5a71a9fe5"},
-    {file = "tensorflow_io_gcs_filesystem-0.26.0-cp39-cp39-win_amd64.whl", hash = "sha256:2940b4ab6848ef5ec34dc3c140b5ae9eba0da13453da839c30ebe3461a6eb51d"},
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+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:b3a0ebfeac11507f6fc96162b8b22010b7d715bb0848311e54ef18d88f07014a"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp310-cp310-win_amd64.whl", hash = "sha256:244754af85090d3fdd67c0b160bce8509e9a43fefccb295e3c9b72df21d9db61"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp37-cp37m-macosx_10_14_x86_64.whl", hash = "sha256:3e510134375ed0467d1d90cd80b762b68e93b429fe7b9b38a953e3fe4306536f"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:e21842a0a7c906525884bdbdc6d82bcfec98c6da5bafe7bfc89fd7253fcab5cf"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp37-cp37m-win_amd64.whl", hash = "sha256:5c809435233893c0df80dce3d10d310885c86dcfb08ca9ebb55e0fcb8a4e13ac"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp38-cp38-macosx_10_14_x86_64.whl", hash = "sha256:4cc906a12bbd788be071e2dab333f953e82938b77f93429e55ad4b4bfd77072a"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:1ad97ef862c1fb3f7ba6fe3cb5de25cb41d1c55121deaf00c590a5726a7afe88"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp38-cp38-win_amd64.whl", hash = "sha256:9cf6a8efc35a04a8c3d5ec4c6b6e4931a6bc8d4e1f9d9aa0bad5fd272941c886"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp39-cp39-macosx_10_14_x86_64.whl", hash = "sha256:f7d24da555e2a1fe890b020b1953819ad990e31e63088a77ce87b7ffa67a7aaf"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:ed17c281a28df9ab0547cdf166e885208d2a43db0f0f8fbe66addc4e23ee36ff"},
+    {file = "tensorflow_io_gcs_filesystem-0.27.0-cp39-cp39-win_amd64.whl", hash = "sha256:152f4c20e5341d486df35f7ce9751a441ed89b43c1036491cd2b30a742fbe20a"},
 ]
 termcolor = [
-    {file = "termcolor-1.1.0.tar.gz", hash = "sha256:1d6d69ce66211143803fbc56652b41d73b4a400a2891d7bf7a1cdf4c02de613b"},
+    {file = "termcolor-2.0.1-py3-none-any.whl", hash = "sha256:7e597f9de8e001a3208c4132938597413b9da45382b6f1d150cff8d062b7aaa3"},
+    {file = "termcolor-2.0.1.tar.gz", hash = "sha256:6b2cf769e93364a2676e1de56a7c0cff2cf5bd07f37e9cc80b0dd6320ebfe388"},
+]
+terminado = [
+    {file = "terminado-0.15.0-py3-none-any.whl", hash = "sha256:0d5f126fbfdb5887b25ae7d9d07b0d716b1cc0ccaacc71c1f3c14d228e065197"},
+    {file = "terminado-0.15.0.tar.gz", hash = "sha256:ab4eeedccfcc1e6134bfee86106af90852c69d602884ea3a1e8ca6d4486e9bfe"},
 ]
 terminaltables = [
     {file = "terminaltables-3.1.10-py2.py3-none-any.whl", hash = "sha256:e4fdc4179c9e4aab5f674d80f09d76fa436b96fdc698a8505e0a36bf0804a874"},
@@ -4217,8 +5143,12 @@ threadpoolctl = [
     {file = "threadpoolctl-3.1.0.tar.gz", hash = "sha256:a335baacfaa4400ae1f0d8e3a58d6674d2f8828e3716bb2802c44955ad391380"},
 ]
 tifffile = [
-    {file = "tifffile-2021.11.2-py3-none-any.whl", hash = "sha256:2e0066f90e2dbeb3e6a287cfd78bafbd2f142fabbca4a76a8ff809573baf5ad5"},
-    {file = "tifffile-2021.11.2.tar.gz", hash = "sha256:153e31fa1d892f482fabb2ae9f2561fa429ee42d01a6f67e58cee13637d9285b"},
+    {file = "tifffile-2022.8.12-py3-none-any.whl", hash = "sha256:1456f9f6943c85082ef4d73f5329038826da67f70d5d513873a06f3b1598d23e"},
+    {file = "tifffile-2022.8.12.tar.gz", hash = "sha256:3e74e0fd48838477ebcf40e09b7780bd095ee5920b2238f485e2c68463a3dcb4"},
+]
+tinycss2 = [
+    {file = "tinycss2-1.1.1-py3-none-any.whl", hash = "sha256:fe794ceaadfe3cf3e686b22155d0da5780dd0e273471a51846d0a02bc204fec8"},
+    {file = "tinycss2-1.1.1.tar.gz", hash = "sha256:b2e44dd8883c360c35dd0d1b5aad0b610e5156c2cb3b33434634e539ead9d8bf"},
 ]
 toml = [
     {file = "toml-0.10.2-py2.py3-none-any.whl", hash = "sha256:806143ae5bfb6a3c6e736a764057db0e6a0e05e338b5630894a5f779cabb4f9b"},
@@ -4246,12 +5176,12 @@ tornado = [
     {file = "tornado-6.2.tar.gz", hash = "sha256:9b630419bde84ec666bfd7ea0a4cb2a8a651c2d5cccdbdd1972a0c859dfc3c13"},
 ]
 tqdm = [
-    {file = "tqdm-4.64.0-py2.py3-none-any.whl", hash = "sha256:74a2cdefe14d11442cedf3ba4e21a3b84ff9a2dbdc6cfae2c34addb2a14a5ea6"},
-    {file = "tqdm-4.64.0.tar.gz", hash = "sha256:40be55d30e200777a307a7585aee69e4eabb46b4ec6a4b4a5f2d9f11e7d5408d"},
+    {file = "tqdm-4.64.1-py2.py3-none-any.whl", hash = "sha256:6fee160d6ffcd1b1c68c65f14c829c22832bc401726335ce92c52d395944a6a1"},
+    {file = "tqdm-4.64.1.tar.gz", hash = "sha256:5f4f682a004951c1b450bc753c710e9280c5746ce6ffedee253ddbcbf54cf1e4"},
 ]
 traitlets = [
-    {file = "traitlets-5.3.0-py3-none-any.whl", hash = "sha256:65fa18961659635933100db8ca120ef6220555286949774b9cfc106f941d1c7a"},
-    {file = "traitlets-5.3.0.tar.gz", hash = "sha256:0bb9f1f9f017aa8ec187d8b1b2a7a6626a2a1d877116baba52a129bfa124f8e2"},
+    {file = "traitlets-5.4.0-py3-none-any.whl", hash = "sha256:93663cc8236093d48150e2af5e2ed30fc7904a11a6195e21bab0408af4e6d6c8"},
+    {file = "traitlets-5.4.0.tar.gz", hash = "sha256:3f2c4e435e271592fe4390f1746ea56836e3a080f84e7833f0f801d9613fec39"},
 ]
 tune-sklearn = [
     {file = "tune_sklearn-0.4.3-py3-none-any.whl", hash = "sha256:9b399f6f0ecaedf628026c3924508e975cab21dd1541d4094742f71c2d442bf8"},
@@ -4269,8 +5199,8 @@ urllib3 = [
     {file = "urllib3-1.26.12.tar.gz", hash = "sha256:3fa96cf423e6987997fc326ae8df396db2a8b7c667747d47ddd8ecba91f4a74e"},
 ]
 virtualenv = [
-    {file = "virtualenv-20.16.2-py2.py3-none-any.whl", hash = "sha256:635b272a8e2f77cb051946f46c60a54ace3cb5e25568228bd6b57fc70eca9ff3"},
-    {file = "virtualenv-20.16.2.tar.gz", hash = "sha256:0ef5be6d07181946891f5abc8047fda8bc2f0b4b9bf222c64e6e8963baee76db"},
+    {file = "virtualenv-20.16.5-py3-none-any.whl", hash = "sha256:d07dfc5df5e4e0dbc92862350ad87a36ed505b978f6c39609dc489eadd5b0d27"},
+    {file = "virtualenv-20.16.5.tar.gz", hash = "sha256:227ea1b9994fdc5ea31977ba3383ef296d7472ea85be9d6732e42a91c04e80da"},
 ]
 vispy = [
     {file = "vispy-0.10.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:58057de0a8995a384b8b4163e912cbe2b80a2034afdb6d437739a9fa5c70d921"},
@@ -4295,7 +5225,11 @@ wcwidth = [
     {file = "wcwidth-0.2.5-py2.py3-none-any.whl", hash = "sha256:beb4802a9cebb9144e99086eff703a642a13d6a0052920003a230f3294bbe784"},
     {file = "wcwidth-0.2.5.tar.gz", hash = "sha256:c4d647b99872929fdb7bdcaa4fbe7f01413ed3d98077df798530e5b04f116c83"},
 ]
-werkzeug = [
+webencodings = [
+    {file = "webencodings-0.5.1-py2.py3-none-any.whl", hash = "sha256:a0af1213f3c2226497a97e2b3aa01a7e4bee4f403f95be16fc9acd2947514a78"},
+    {file = "webencodings-0.5.1.tar.gz", hash = "sha256:b36a1c245f2d304965eb4e0a82848379241dc04b865afcc4aab16748587e1923"},
+]
+Werkzeug = [
     {file = "Werkzeug-2.2.2-py3-none-any.whl", hash = "sha256:f979ab81f58d7318e064e99c4506445d60135ac5cd2e177a2de0089bfd4c9bd5"},
     {file = "Werkzeug-2.2.2.tar.gz", hash = "sha256:7ea2d48322cc7c0f8b3a215ed73eabd7b5d75d0b50e31ab006286ccff9e00b8f"},
 ]
@@ -4303,6 +5237,10 @@ wheel = [
     {file = "wheel-0.37.1-py2.py3-none-any.whl", hash = "sha256:4bdcd7d840138086126cd09254dc6195fb4fc6f01c050a1d7236f2630db1d22a"},
     {file = "wheel-0.37.1.tar.gz", hash = "sha256:e9a504e793efbca1b8e0e9cb979a249cf4a0a7b5b8c9e8b65a5e39d49529c1c4"},
 ]
+widgetsnbextension = [
+    {file = "widgetsnbextension-4.0.3-py3-none-any.whl", hash = "sha256:7f3b0de8fda692d31ef03743b598620e31c2668b835edbd3962d080ccecf31eb"},
+    {file = "widgetsnbextension-4.0.3.tar.gz", hash = "sha256:34824864c062b0b3030ad78210db5ae6a3960dfb61d5b27562d6631774de0286"},
+]
 wrapt = [
     {file = "wrapt-1.14.1-cp27-cp27m-macosx_10_9_x86_64.whl", hash = "sha256:1b376b3f4896e7930f1f772ac4b064ac12598d1c38d04907e696cc4d794b43d3"},
     {file = "wrapt-1.14.1-cp27-cp27m-manylinux1_i686.whl", hash = "sha256:903500616422a40a98a5a3c4ff4ed9d0066f3b4c951fa286018ecdf0750194ef"},
diff --git a/pyproject.toml b/pyproject.toml
index 704f8db07203e6069afcd8a3d4b676e7dbd6fe62..04612bcf53e4f828e9fdb3668619feed02b20e03 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "aliby"
-version = "0.1.41"
+version = "0.1.42"
 description = "Process and analyse live-cell imaging data"
 authors = ["Alan Munoz <alan.munoz@ed.ac.uk>"]
 packages = [
@@ -12,14 +12,15 @@ packages = [
 readme = "README.md"
 
 [tool.poetry.dependencies]
-python = ">=3.8,<3.11"
+python = ">=3.8, <3.11"
 PyYAML = "^6.0"
 py-find-1st = "^1.1.5"
-opencv-python = "*"
 scipy = ">=1.7.3"
 flatten-dict = "^0.4.2"
-numpy = "1.21.6" # Pinning numpy and pandas makes dep resolution much faster
-pandas = "1.3.3"
+numpy = ">=1.21.6" # Pinning numpy and pandas makes dep resolution much faster
+pandas = ">=1.3.3"
+aliby-baby = "^0.1.14"
+gaussianprocessderivatives = "^0.1.5"
 
 [tool.poetry.group.pipeline.dependencies]
 dask = "^2021.12.0"
@@ -30,24 +31,17 @@ scikit-image = ">=0.18.1"
 requests-toolbelt = "^0.9.1"
 h5py = "2.10" # File I/O
 imageio = "2.8.0" # For image-visualisation utilities
-aliby-agora = "^0.2.30"
-aliby-baby = "^0.1.14"
-aliby-post = "^0.1.36"
 p-tqdm = "^1.3.3" # Parallel progress bars
 xmltodict = "^0.13.0" # read ome-tiff metadata
 # zeroc-ice = {version="3.6.5", optional=true} # To be set as optional in the future
 
 [tool.poetry.group.postprocessor.dependencies]
-numpy = "1.21.6" # Pinning numpy and pandas makes dep resolution much faster
-pandas = "1.3.3"
 scipy = ">=1.4.1"
 PyYAML = "^6.0"
 more-itertools = "^8.12.0"
 leidenalg = "^0.8.8"
-aliby-agora = "^0.2.33"
 seaborn = "^0.11.2"
 scikit-learn = ">=0.22"
-gaussianprocessderivatives = "^0.1.2"
 p-tqdm = "^1.3.3"
 pycatch22 = "^0.4.2"
 pathos = "^0.2.8" # Lambda-friendly multithreading
@@ -78,13 +72,24 @@ optional = true
 [tool.poetry.group.test.dependencies]
 pytest = "^6.2.5"
 
+
+[tool.poetry.group.dev.dependencies]
+black = "^22.6.0"
+mypy = "^0.930"
+numpydoc = "^1.3.1"
+isort = "^5.10.1"
+jupyter = "^1.0.0"
+flake8 = "^4.0.1"
+pyright = "^1.1.258"
+pre-commit = "^2.20.0"
+
 [build-system]
 requires = ["setuptools", "poetry-core>=1.0.0"]
 build-backend = "poetry.core.masonry.api"
 
 [tool.black]
 line-length = 79
-target-version = ['py37']
+target-version = ['py38']
 include = '\.pyi?$'
 extend-exclude = '''
 /(