From e981cd441a38eb23e93774c8998b5201bbbce8e4 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Al=C3=A1n=20Mu=C3=B1oz?= <amuoz@ed.ac.uk> Date: Thu, 23 Jun 2022 13:57:04 +0100 Subject: [PATCH] isort tiler --- aliby/tile/tiler.py | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/aliby/tile/tiler.py b/aliby/tile/tiler.py index 575dddaf..092c583f 100644 --- a/aliby/tile/tiler.py +++ b/aliby/tile/tiler.py @@ -1,15 +1,18 @@ """Segment/segmented pipelines. Includes splitting the image into traps/parts, cell segmentation, nucleus segmentation.""" -import warnings from functools import lru_cache +from pathlib import PosixPath +from typing import Union + +import dask.array as da import h5py import numpy as np -from skimage.registration import phase_cross_correlation - from agora.abc import ParametersABC, ProcessABC from agora.io.writer import load_attributes -from aliby.io.image import Image +from skimage.registration import phase_cross_correlation + +from aliby.io.image import Image, ImageLocal from aliby.tile.traps import segment_traps -- GitLab