diff --git a/pyproject.toml b/pyproject.toml new file mode 100644 index 0000000000000000000000000000000000000000..880a2a12ae1afb758fb6baaab64dc9c4296162d3 --- /dev/null +++ b/pyproject.toml @@ -0,0 +1,44 @@ +[tool.poetry] +name = "aliby" +version = "0.1.4" +description = "" +authors = ["Alan Munoz <alan.munoz@ed.ac.uk>"] + +[tool.poetry.dependencies] +python = ">=3.7.1,<3.11" +# extraction = {git = "ssh://git@git.ecdf.ed.ac.uk/swain-lab/python-pipeline/extraction"} +# postprocessor = {git = "ssh://git@git.ecdf.ed.ac.uk/swain-lab/python-pipeline/post-processing"} +# baby = {git = "ssh://git@git.ecdf.ed.ac.uk/swain-lab/python-pipeline/baby"} +# logfile_parser = {git = "ssh://git@git.ecdf.ed.ac.uk/swain-lab/python-pipeline/logfile_parser"} +# extraction = {path="../extraction", develop=false} +# postprocessor = {path="../postprocessor", develop=false} +# baby = {path="../baby", develop=false} +# logfile_parser = {path="../logfile_parser", develop=false} +ray = {version = "1.4.0", extras = ["tune"]} +numpy = "^1.21.4" +dask = "^2021.12.0" +pathos = "^0.2.8" +tqdm = "^4.62.3" +pandas = "^1.3.5" +scikit-image = "^0.19.1" +opencv-python = "^4.5.4" +requests-toolbelt = "^0.9.1" +h5py = "2.10" +tables = "^3.6.1" +imageio = "2.8.0" +omero-py = ">=5.6.2" +zeroc-ice = "3.6.5" +tensorflow = ">=1.15,<=2.3" +aliby-parser = "*" +aliby-extraction = "*" +aliby-post = "*" +aliby-agora = "*" +aliby-baby = "*" + + +[tool.poetry.dev-dependencies] +black = "^21.9b0" + +[build-system] +requires = ["setuptools", "poetry-core>=1.0.0"] +build-backend = "poetry.core.masonry.api"