diff --git a/examples/plot_kymograph.py b/examples/plot_kymograph.py index e32cb7d89bd5f6476724d2368973a4f8da115310..07ab1b69b91bf520912fad7c9a3828a855cce9ea 100644 --- a/examples/plot_kymograph.py +++ b/examples/plot_kymograph.py @@ -28,6 +28,7 @@ for dataname in datasets: ) # sorted kymograph t, data = dl.get_time_series("median_GFP", group=groups[0]) + # sort by mean median_GFP over first five hours sort_order = sort_by_maximum(data[:, t < 5], np.nanmean) kymograph( dl.df, diff --git a/src/wela/plotting.py b/src/wela/plotting.py index 8595309e290bfb6dde246c812920467b9f0acd62..d7a0700e5a103fb780ccb20693e87425416cf022 100644 --- a/src/wela/plotting.py +++ b/src/wela/plotting.py @@ -610,7 +610,7 @@ def bud_to_bud_plot( colour="b", group=None, nbins=None, - no_future_buddings=2, + no_future_buddings=1, return_signal=False, df=None, title=None,