GitLab

This Snakemake pipeline implements the GATK best-practices workflow

Machine learning software and library for inter-atomic potentials development

Data integration pipeline for cleaning RNA-Seq data, GWAS, virology, etc. and inserting into SQL

Utilities for Lattice analysis

Nextflow pipeline to run both rCOGS and Blockshifter

Repository for launching the baal-nf pipeline on deeply sequenced CLIP-seq samples

mtDNA variant calling using the Remove the NUMTs algorithm

Genome-wide association analysis of COVID-19 patients vs. controls.

Richardson Lab website

Simulation and analysis for a model coupling 3D chromatin structure and transcriptional dynamics

University of Edinburgh contributions to the quantification of variables in the UK SSP project.