Explore projects

MorphOMatic is a MATLAB-based app designed to extract cellular features across 2D microscopy slides.

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Simulation and analysis for a model coupling 3D chromatin structure and transcriptional dynamics

Notes on how to run nf-core on Eddie

The Python programming component of the Programming and Data Analysis (2nd Year) course.

This repository contains working examples of things I have presented on my research blog blogs.ed.ac.uk/mark-naylor

Sample Project for the Software Testing course of the University of Edinburgh.

home of the reading group

Generate diffuse scattering patterns from multiple CIF files

Tweak Blackboard Learn content items without API access

Examples to support our Slurm Compute Cluster documentation: www.ph.ed.ac.uk/slurm