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Gitlab CI/CD configuration and Nix/Docker environment, documented in Quarto website

a simple git repo for practice

A record of the code and analysis reported in Anderson et al, 2024 to investigate the strand specificity of DNA damage, repair and its subsequent mutagenicity. This code is not intended as a generalisable and portable software package, rather serves to allow for reproduction of the reported analyses. Code within the repository could be adapted for more generalised analysis and has been licensed to allow this.

EIDF Services Documentation

Slides on algebraic statistics for The University of Edinburgh/Heriot-Watt University joint postgraduate colloquium. . Given on the 6th November 2020.

Source code for my MMathPhys dissertation on folded hyperkahler manifolds at The University of Warwick.

Sage Jupyter notebook with interactive plots to quickly see Gamma, Theta curves and maybe lambda+tilt walls

This project is a collection of materials for the ARCHER2 LAMMPS course, first run on the 4th-18th May 2020.

Jupyter notebooks for performing the entire pyRBDome analyses.