Explore projects

Tutorial on plotting in Python

Build template for Maven

Arin's user scripts for https://git.ecdf.ed.ac.uk/swain-lab/aliby. Derived from https://git.ecdf.ed.ac.uk/swain-lab/aliby/skeletons/-/commits/arin. For portfolio purposes -- some code is not functional because credentials are deleted.

The Python programming component of the Programming and Data Analysis (2nd Year) course.

Generic configuration for running Nextflow pipelines on Eddie.

R tool to identify samples affected by experimental error and quantify the degree of contamination in paired tumour:normal sequence data.

lab for anlp

End-to-end automated processing of live-cell imaging data. Mirror of https://gitlab.com/aliby/aliby, for the purposes of getting it under the swain-lab group on the University of Edinburgh GitLab server, to create an upstream repository for forks. DO NOT TOUCH THIS REPOSITORY.

Repository for managing the student material on the Math and Comp 2018 course.

Ab Initio Augmented Structure Solving Engine

Hybrid methodology combining Empirical Potential-based Structure Refinement (EPSR) fitting of total scattering data with first-principles quantum mechanical calculations (Density Functional Theory).

Stable and closed version of the AIASSE package (v1.0)

Wu zheng's houours project.