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Code for identifying amino acid residues that interact with RNA- and/or DNA in pdb files of ribonucleoprotein complexes.

🚧 Working In Progress 🚧 A build template for Rust

Translation of steinarh's shell script tutorial - formatted as an executable jupyter notebook.

Custom scripts used for Masalmeh et al 2019

GitLab CI template for Dependency-Track

Codes to model melts of supercoiled DNA plasmids

Microbe data for day3 of Oxford Statistical Genomics Summer School 2022

Codes to run "superstructure" a modified version of DBSCAN. See https://rupress.org/jcb/article/220/5/e202010003/211893/Parameter-free-molecular-super-structures