Explore projects

Codes to run "superstructure" a modified version of DBSCAN. See https://rupress.org/jcb/article/220/5/e202010003/211893/Parameter-free-molecular-super-structures

Codes to simulate DNA integration in DNA braids.

mtDNA variant calling using the Remove the NUMTs algorithm

TURP shows how IoT entities can manage the trust they have in others and make privacy decisions based on that. This implementation is part of our paper "TURP: Managing Trust for Regulating Privacy in Internet of Things" by N. Kokciyan, P. Yolum.

A fork from https://github.com/slzhao/GTQC.git

precision_medicine_project_template

Here you will find instructions on how to perform and analyse Molecular Dynamics simulations of DNA with different models.

QuantiCam Firmware for the OpalKelly board reading the QuantiCam SPAD sensor array.

A command-line Java application to parse and execute Relational Algebra queries

Schemas for GrainDB

Slides for my talk for a Women in STEM Society event.