Explore projects

UrbanZoo whole genome sequencing manuscript analyses and data.

A module that uses Gaussian processes to estimate first and second derivatives.

Bayesian ETAS implementation using Inlabru for the next time-dependent models RISE forecasting experiment for Italy

Mitochondrial variant caller benchmarking for low coverage single-cell RNA-Seq data.

Code to reproduce the experiments presented in: "Hierarchical complexity of the macro-scale neonatal brain"

Plot heterozygosity from WGS VCFs

mtDNA variant calling using the Remove the NUMTs algorithm

Nextflow pipeline for cell-level variant calling in 10x single-cell RNA-sequencing data.

Comparison of PCAWG "TNT" deletion rates vs housekeeping gene expression.

Analyses relating to mouse tumour, RPE1 bottlenck, pol2-M644G rnh201 KO yeast and de novo indel variants

Repository for launching the baal-nf pipeline on deeply sequenced CLIP-seq samples

Richardson Lab website