Explore projects
-
-
-
-
NUMT removal and variant caller benchmarking for low mtDNA heteroplasmies.
Updated -
-
s1554563 / rnaseq
MIT LicenseRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Updated -
s1554563 / nextflow_rnaseq
MIT LicenseRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Updated -
Repository for launching the baal-nf pipeline on deeply sequenced CLIP-seq samples
Updated -
Nextflow pipeline for cell-level variant calling in 10x single-cell RNA-sequencing data.
Updated -
Mitochondrial variant caller benchmarking for low coverage single-cell RNA-Seq data.
Updated -
Nextflow pipeline for retrieving sequencing depths of samples mitochondrial genomes.
Updated -
-
Updated
-
Graeme Grimes / Quantitative Nucleosome Analysis
CeCILL Free Software License Agreement v2.1Updated -
Scripts and template configuration files for the trio whole exome sequencing analysis done under contract to the NHS Scotland Clinical Genetics Services.
Updated -
Updated