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sgrannem / pyCRAC
Apache License 2.0Python software for processing CRAC and CLIP type data. Compatible with Python 2 and 3.
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sgrannem / CRAC Pipelines
Apache License 2.0Contains ruffus pipelines for running the entire single-end or paired-end CRAC pipelines.
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A toolbox of utilities and demonstrations to support signals and systems teaching in the School of Engineering
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s2450521 / clustree
GNU General Public License v3.0 or laterIn development: Visualize clusterings at different resolutions
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Instruction on setting up a VScode project of sycl on a Linux system (ubuntu)
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Here you will find the c++ codes and LAMMPS scripts to run simulations of the topological relaxation of bead-spring polymers (which are initially knotted) by the action of a simulated TopoII protein.
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This is a repo for codes to simulate trans-grabbing loop extrusion factors (developed by Andrea Bonato)
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Swain Lab / aliby / aliby
GNU Affero General Public License v3.0End-to-end automated processing of live-cell imaging data.
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