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Codes to simulate recoloring of a polymer based on competing epigenetic marks.
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Codes to simulate condensins and loop extruders that can grab polymer segments in 3D. Developed by Andrea Bonato
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Ta-dah / MODELS
GNU General Public License v3.0 or laterUpdated -
Ta-dah / Ta-dah.LAMMPS
GNU General Public License v3.0 or laterUpdated -
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Here you will find the c++ codes to create the initial configurations and the LAMMPS script to run the simulations of linear and ring DNA molecules.
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