Explore projects
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ISARIC-4C / WP5 Data Integration
MIT LicenseData integration pipeline for cleaning RNA-Seq data, GWAS, virology, etc. and inserting into SQL
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R package for creation and manipulation of vocalisation diagrams and speech interaction.
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###Source data for analysis of explanatory variables associated with neonatal intramuscular vitamin K administration in Scotland###
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University of Edinburgh contributions to the quantification of variables in the UK SSP project.
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Scripts and template configuration files for the trio whole exome sequencing analysis done under contract to the NHS Scotland Clinical Genetics Services.
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ddekler / snakemake-basic
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Underlying code for manuscript "Spatio-temporal characteristics of the SARS-CoV-2 Omicron variant spread at fine geographical scales, and comparison to earlier variants"
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s1554563 / rnaseq
MIT LicenseRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
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Bayesian ETAS implementation using Inlabru for the next time-dependent models RISE forecasting experiment for Italy
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Graeme Grimes / Quantitative Nucleosome Analysis
CeCILL Free Software License Agreement v2.1Updated