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chnfsv4acl is a tool for creating and applying GPFS NFSv4 ACLs to files and directories, either individually or recursively.
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Stage and process BAMs using Canvas (https://github.com/Illumina/canvas)
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Scripts and template configuration files for the trio whole exome sequencing analysis done under contract to the NHS Scotland Clinical Genetics Services.
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Analysis code and pipelines from the Liver Cancer Evolution (LCE) consortium Lesion Segregation (LS) project.
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Analysis of poly-A selected RNA sequencing from human whole blood samples of COVID-19 patients.
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Scripts for analysis of sequencing data for Irene Kallimasioti Pazi's PhD thesis.
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The code repo for the Changing of the Guards empirical framework for investigating Tor path selection.
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Pan-cancer analysis of deletion mutation patterns relative to genic transcription.
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Genome wide analysis of emRiboSeq embedded ribonucleotide context preferences.
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RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
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RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
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