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Porting to dsl2. Using egapass file instead of --ega_password, moving...
Porting to dsl2. Using egapass file instead of --ega_password, moving ega-cryptor JAR to moduleDir - removes need to specify --ega_cryptor
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- README.md 6 additions, 6 deletionsREADME.md
- main.nf 25 additions, 93 deletionsmain.nf
- modules/local/ega/collectruncsvs.nf 18 additions, 0 deletionsmodules/local/ega/collectruncsvs.nf
- modules/local/ega/encrypt/environment.yml 8 additions, 0 deletionsmodules/local/ega/encrypt/environment.yml
- modules/local/ega/encrypt/main.nf 33 additions, 0 deletionsmodules/local/ega/encrypt/main.nf
- modules/local/ega/encrypt/resources/ega-cryptor-2.0.0.jar 0 additions, 0 deletionsmodules/local/ega/encrypt/resources/ega-cryptor-2.0.0.jar
- modules/local/ega/upload/environment.yml 9 additions, 0 deletionsmodules/local/ega/upload/environment.yml
- modules/local/ega/upload/main.nf 27 additions, 0 deletionsmodules/local/ega/upload/main.nf
- nextflow.config 19 additions, 5 deletionsnextflow.config
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