download_gnomADg.sh

#!/bin/bash
#PBS -l walltime=48:00:00
#PBS -l ncpus=1,mem=2gb
#PBS -q uv2000
#PBS -N download_gnomADg
#PBS -j oe


DATA_DIR=/home/u035/project/resources/gnomad/r2.1/genomes

cd ${DATA_DIR}

wget ftp://ftp.ensembl.org/pub/data_files/homo_sapiens/GRCh38/variation_genotype/gnomad/r2.1/genomes/*.gz
wget ftp://ftp.ensembl.org/pub/data_files/homo_sapiens/GRCh38/variation_genotype/gnomad/r2.1/genomes/*.tbi