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Commit 13c72683 authored by ameyner2's avatar ameyner2
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Merge branch 'master' of git.ecdf.ed.ac.uk:igmmbioinformatics/trio-whole-exome

parents 210f0056 e1785a53
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docs/SOP_alignment_variant_annotation.md
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...@@ -213,7 +213,7 @@ version=<version> ...@@ -213,7 +213,7 @@ version=<version>
sample_suffix=<sample_suffix> sample_suffix=<sample_suffix>
/home/u035/project/scripts/prepare_bcbio_config_crf.sh \ /home/u035/project/scripts/prepare_bcbio_config_crf.sh \
/home/u035/project/scripts/trio_whole_exome_crf_config.sh \ /home/u035/project/scripts/trio_whole_exome_crf_config.sh \
$project_id $version $sample_suffix &> $project_id.log $project_id $version $sample_suffix &> ${version}_${project_id}.log
X=`wc -l $PARAMS_DIR/$project_id.family_ids.txt | awk '{print $1}'` X=`wc -l $PARAMS_DIR/$project_id.family_ids.txt | awk '{print $1}'`
``` ```
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