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Commit 33c93085 authored by not populated not populated's avatar not populated not populated
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Merge branch 'ultra2' of git.ecdf.ed.ac.uk:igmmbioinformatics/trio-whole-exome into ultra2

parents 5639e3b2 77a56e8c
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1 merge request!3Ultra 2 SOP/doc updates
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## Issues
* 447226 - sample 131873 (father) is very low depth (6X), comes up as non-paternity for 114891 as a result but this can be ignored
* 453955 - sample 132058 (proband) comes up as incorrect sex (annotated as female in PED file but no evidence of Y coverage)
* 453955 - sample 132058 (proband) comes up as incorrect sex due to het ratio, annotated as female in PED file, no evidence of Y coverage - will run as female.
## Notes
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