Adding BCBio config, connecting up workflows properly (ab4f1f5d) · Commits · igmmbioinformatics / trio-whole-exome · GitLab

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ab4f1f5d

Commit ab4f1f5d authored 3 years ago by mwham

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Adding BCBio config, connecting up workflows properly

parent 3dc7bc2f

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Changes 7
Pipelines 1

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environment.yml 1 addition, 1 deletion

environment.yml
pipeline/inputs.nf 0 additions, 1 deletion

pipeline/inputs.nf
pipeline/main.nf 100 additions, 0 deletions

pipeline/main.nf
pipeline/validation.nf 26 additions, 25 deletions

pipeline/validation.nf
tests/run_tests.sh 18 additions, 23 deletions

tests/run_tests.sh
tests/scripts/bcbio_nextgen.py 4 additions, 0 deletions

tests/scripts/bcbio_nextgen.py
tests/scripts/test_config.sh 18 additions, 0 deletions

tests/scripts/test_config.sh

with 167 additions and 50 deletions

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