Commits · 356edbb6ec664f18a16038932b842fb2159459bf · igmmbioinformatics / trio-whole-exome

Dec 14, 2021
- Fixed to do all samples · 0edd2635
  not populated not populated authored 3 years ago
  
  0edd2635
Dec 13, 2021
- Adjusted file paths for new Edinburgh Genomics download structure · a0b94770
  not populated not populated authored 3 years ago
  
  a0b94770
Oct 04, 2021
- Renaming prepare bcbio config scripts for consistency · adde4a3c
  not populated not populated authored 3 years ago
  
  adde4a3c
Oct 01, 2021
- Make results params directory · aa6028be
  not populated not populated authored 3 years ago
  
  aa6028be
Sep 30, 2021
- Changed to using short project id, version comes after project id, per-family... · 738e0fb5
  not populated not populated authored 3 years ago
  
  Changed to using short project id, version comes after project id, per-family PED and CSV files move to results/project_version/params folder
  738e0fb5
Apr 07, 2021
- Changed symlink creation to a new temporary folder · fd2160e7
  ameyner2 authored 3 years ago
  
  fd2160e7
Mar 23, 2021
- Edinburgh Genomics change of FASTQ folders · fe372d2c
  ameyner2 authored 4 years ago
  
  fe372d2c
Sep 23, 2020
- Added run version info · 4fe27086
  ameyner2 authored 4 years ago
  
  4fe27086
Aug 28, 2020
- Using symlinks to get around bcbio issues with file merging · e785f110
  ameyner2 authored 4 years ago
  
  e785f110
Nov 26, 2019
- Reads are merged/linked into per-project directories to avoid sample id collisions for repeats. · 6cc144e5
  ameyner2 authored 5 years ago
  
  6cc144e5
Oct 16, 2019
- Fixed bug with DOS newlines in PED file causing variant target regions not to... · c1131b20
  ameyner2 authored 5 years ago
  
  Fixed bug with DOS newlines in PED file causing variant target regions not to be included in the YAML config file properly
  c1131b20
Sep 23, 2019
- Initial commit · 796251ce
  ameyner2 authored 5 years ago
  
  796251ce