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Created with Raphaël 2.2.01Mar29Feb2019119Dec12430Nov2831Oct2431Aug29221817161523Jun2216141312922May121014Apr31Mar291510Feb8Dec12Oct15Sep24Aug16151043231Jul2813121129Jun2221178731May25242320191812104219Apr1312129Mar2325Feb2324Jan1314Dec13723Nov221918171615227Oct1486542130Sep29730Aug2623181321Jul1418Jun153May230Apr29723Mar15Feb8Dec27Oct30Sep28239328Aug27262524191730Jun10Feb69Jan826Nov2518Oct171625Sep23Update SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdUpdate SOP_variant_prioritization.mdAdd new fileUpdate SOP_alignment_variant_annotation.mdUpdate SOP_alignment_variant_annotation.mdUpdate SOP_alignment_variant_annotation.mdFixes in from MikeAdded procedure for dropping an unaffected parent with a problematic sample from a trio and running the proband as a singleton, while retaining both parental samples for reference.Added steps on locking & unlocking filesFixed path for QC report dataFixed path for QC report dataFixed PATH for bcbio toolsbatch id no longer needed for PED checkMerge branch 'u035-prod' of git.ecdf.ed.ac.uk:igmmbioinformatics/trio-whole-exome into u035-prodbinding the prod folder for singularity IGVUpdate SOP_filezilla_setup.mdUpdated production data/analysis locations to u035-prodRemoved Nextflow scripts from u035-prod branchUpdated u035 -> u035-prod for production data and analysis